Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g1303 ATGTTTTCTCTTCATCATCATCATCAGTTTCTTGCATGTTTCTTCTTTCTGATGTGTCTGGTGGGCTTATTGGGATGTGCAGAATTAGCAAGTGCACAGTATTATCAGAAAATCGGAGAGAAACTTGTCCCTTACTGGAAGATCACCGTCGACCCCGCCGGCACCGGCAACTTCACCACCATACAAGAAGCCATAAACTCAATCCCTTCCAACAACAACAACTGGGTTTCCATCAATGTAAAGCCAGGCATCTATAGGGAAAAAGTGAGGATTCCTGATGATAAGCCTTATATAGTATTGAAAGGAGCAGGGAAGAGGAGATCTATTGTAGTTTGGGATGATCATGAAACAGTGGCCCAGAGTCCTACGTTTACGTTGCTGGCTGATAATGTTGTCGTCAAATGCTTGAGCTTTCGGAATTCCTACAATAATCCGATCAACAGCAACCGGAGGAAACCGGCGGTGGCGGCAATGGTGGCCAGCGATAAGGCTTTCTTCTTTCGAGTAGGCTTCTTTGGTTTACAAGACACATTGTGGGATGATCAAGGAAGGCATTACTACAAACTTTGTACCATTCAAGGTGCTGTTGACTTTATTTTTGGTGCTGGCCAATCTGTGTTTGAGAGATGTTCAATATCAGTGATTGCTGGAGCCCTAGATGGGCTACCAGGGTTTATAACAGCACAAGGAAGAACAAATCCAAATGATGCAAATGGATTTGTGTTCAAAGACTGCCACGTGTTCGGGAATGGAACAACATACTTGGGAAGGCCTTGGAGAAGTTATTCAAGAGTTCTCTTCTACAGAACCAATATGTCTCAAGTTGTTGAACCAAAGGGTTGGCAGCCTTGGAGTTTTGCTACGAATGTGAATAGGGTAACATTTGCAGAATATGGGTGTTTTGGGCCTGGCTCTAACACATCCCAAAGAGTGAGCTGGTCAAAGAAGAATCTTGATTCATTATATGTGGAGCAAATGGCTAATATGAGCTTCATTGATTCTGAAGGATGGCTTCAGAATCAACTTTTCTGA 1032 0.4331 MFSLHHHHQFLACFFFLMCLVGLLGCAELASAQYYQKIGEKLVPYWKITVDPAGTGNFTTIQEAINSIPSNNNNWVSINVKPGIYREKVRIPDDKPYIVLKGAGKRRSIVVWDDHETVAQSPTFTLLADNVVVKCLSFRNSYNNPINSNRRKPAVAAMVASDKAFFFRVGFFGLQDTLWDDQGRHYYKLCTIQGAVDFIFGAGQSVFERCSISVIAGALDGLPGFITAQGRTNPNDANGFVFKDCHVFGNGTTYLGRPWRSYSRVLFYRTNMSQVVEPKGWQPWSFATNVNRVTFAEYGCFGPGSNTSQRVSWSKKNLDSLYVEQMANMSFIDSEGWLQNQLF 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g1303 343 FunFam Pectinesterase 44 342 - -
Lele18g1303 343 Gene3D - 46 343 IPR012334 -
Lele18g1303 343 SUPERFAMILY Pectin lyase-like 46 339 IPR011050 -
Lele18g1303 343 Pfam Pectinesterase 48 333 IPR000070 GO:0030599|GO:0042545
Lele18g1303 343 ProSitePatterns Pectinesterase signature 2. 192 201 IPR033131 -
Lele18g1303 343 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 46 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g1303 Lele-ChrLele18 10236596 10241209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g1303 8 284 Carbohydrate Esterase AT2G19150 43.416 1.51e-76 235