Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g1302 ATGCTGTCTCTTTCCTTCCTACTTCCGAACCCATTACCGGCGATTCCTCTTGAACTCTTACGAGCGCATGCATCTAAAAAAGGGAAAACCAATGCATGTTATGTGAAAGTCTGGAAACGTGCAGCTCTTTATGCTGATGACCTTCCATTGGCTTTGAATGTTATTGGTTCTCATTTATTAGGTAAGTCAACAGATGAATGGGAGTTTGCATTGGAGAGATATGAAAAGGTTCCTAATGAAGAAATTATGAATATACTTAGGGTGAGCTTTGATAGTCTGAACCCAAGTGAGAAGCAAGTTTTCCTTGACATTTCATGTTTCTTTGCTGGAGAGTTGTTGGCTTATGTAGAAGTTCTATATGCTTGCGGTTTCTTTCCAAAATATAGCATTGGAGTTCTTATCGATAGATCTCTTGTTTCGATTAGTGTGAATCAAAAGGGTATTGATGCATGA 453 0.3863 MLSLSFLLPNPLPAIPLELLRAHASKKGKTNACYVKVWKRAALYADDLPLALNVIGSHLLGKSTDEWEFALERYEKVPNEEIMNILRVSFDSLNPSEKQVFLDISCFFAGELLAYVEVLYACGFFPKYSIGVLIDRSLVSISVNQKGIDA 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g1302 150 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 17 142 IPR044974 GO:0006952
Lele18g1302 150 Gene3D - 16 94 IPR042197 -
Lele18g1302 150 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 104 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g1302 Lele-ChrLele18 10189266 10190616 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g1302 44 145 WRKY Transcription Factor Family AT5G45050 45.192 1.44e-22 90.9