Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele18g1286 | ATGATAAACTCTTCTCTCTCTCGCAGGATCCACTTGGTTCAATCTTTCTCTGTTGTTTTCCTCTATTGGTTCTACCTTGCTGCATCATTCATTCAAGTTGAAACCCTAGTTTTTGCACATACTACACCAATGGATTCTCCTGGTAGTGGTGGGTCTGGTTCTGCTGATGTTGTTATGGACCAAAAGAAGAGGAAGAGGATGCTGTCGAATCGGGAGTCGGCGCGGCGATCGAGGATGAGGAAGCAGCAACATATGGATGATCTGGTGAGGCAAGTGGGAGATCTGAGGAAGGAGAATGAAGAGATCATGAAGAACTTGAGCTTCACCAGCCAACTTTTTCTGAACATGGAGTCTGAAAATGCAATCTTGAGGACTCAGATGGCTGAGTTGACCAACAGATTGGAATCTCTCAATGAGATCATAGGTTACATAAACAACAACTCAGCCAATAATTACCTCTTTGATGATGATCATAATGAGACTGAAATCATCAATGATTGTGGCTTCTTCTTCAACCCTAATTGGAATCAACCAATCATGGCTTCTGGTGGCAATAATATGATGTATTAA | 570 | 0.4228 | MINSSLSRRIHLVQSFSVVFLYWFYLAASFIQVETLVFAHTTPMDSPGSGGSGSADVVMDQKKRKRMLSNRESARRSRMRKQQHMDDLVRQVGDLRKENEEIMKNLSFTSQLFLNMESENAILRTQMAELTNRLESLNEIIGYINNNSANNYLFDDDHNETEIINDCGFFFNPNWNQPIMASGGNNMMY | 189 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele18g1286 | 189 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 60 | 123 | IPR004827 | GO:0003700|GO:0006355 | |
| Lele18g1286 | 189 | MobiDBLite | consensus disorder prediction | 58 | 83 | - | - | |
| Lele18g1286 | 189 | CDD | bZIP_plant_GBF1 | 63 | 113 | IPR045314 | GO:0003700|GO:0006355 | |
| Lele18g1286 | 189 | Coils | Coil | 113 | 140 | - | - | |
| Lele18g1286 | 189 | SUPERFAMILY | Leucine zipper domain | 62 | 116 | IPR046347 | GO:0003700|GO:0006355 | |
| Lele18g1286 | 189 | Gene3D | - | 60 | 115 | - | - | |
| Lele18g1286 | 189 | Pfam | bZIP transcription factor | 62 | 120 | IPR004827 | GO:0003700|GO:0006355 | |
| Lele18g1286 | 189 | FunFam | BZIP transcription factor | 60 | 111 | - | - | |
| Lele18g1286 | 189 | SMART | brlzneu | 58 | 122 | IPR004827 | GO:0003700|GO:0006355 | |
| Lele18g1286 | 189 | PANTHER | BZIP TRANSCRIPTION FACTOR 44 | 48 | 160 | - | - | |
| Lele18g1286 | 189 | MobiDBLite | consensus disorder prediction | 44 | 83 | - | - | |
| Lele18g1286 | 189 | Coils | Coil | 85 | 105 | - | - | |
| Lele18g1286 | 189 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 65 | 80 | IPR004827 | GO:0003700|GO:0006355 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele18g1286 | Lele-ChrLele18 | 9936550 | 9937254 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele18g1286 | 57 | 169 | bZIP Transcription Factor Family | AT2G18160 | 50.442 | 4.78e-33 | 114 |
Transcription factors information