Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g1264 ATGGAGCTGCATCCGATAACACCCTTGTCTATCTGTTACAAGCGTTGTTCGCTTCAGCTTCTTGATCAGAGAAAGCTCCCTCTAGAAAGTGTTTACTTGGACATTCTGAATTCAACAGATGGCTGGAATGCCATAAAGGATATGGTGGTCCGTGGAGCACCTGCTATTGCTATCGCAGCAGCACTTTCTTTGGCTGTTGAAGTTTTCAATCTAGAGGCATTTAATGGGTCACCTGCTGATGCAGCTTCCTTTCTTGGAGAGAAATTAGATTATCTTGTCTCAAGTCGGCCAACTGCAGTGAACCTTTCAGATGCTGTAACCAAACTCAAAGAAGTTATATCTAAGGCTGTTGCATCTACTACAGAGGCCAAGAGTGTTTTTCAGGCTTATATAGAAGCCGCTGAGATTATGCTTGAGGATGATGTTGCCTCAAATAGAGCAATTGGATCTTATGGAGCTAGTATTATTCAACAACAGACGGGGAAAAGAAAGCTTTCCGTCTTGACCCATTGCAACACTGGAAGTCTTGCCTGTGGTGGATATGGTACTGCTCTAGGGATAATTCGTGCACTTCATAGTGAAGGGGTTTTAGAAAGGGCCTATTGCACAGAAACACGCCCATTCAATCAGGGGTCTAGGCTCACGGCCTATGAGTTGGTGCATGAACACATACCTGGAACTCTTATAGCAGATTCTGCAGCAGCTGCACTGATGAAAGCTGGACGAGTAGATGCTGTTGTTGTTGGGGCAGACCGTGTTACATCAAATGGTGACACAGCCAACAAAATTGGAACCTATAGTGTTGCCTTATGTGCCAAGTTTCATAATGTACCCTTTTACGTGGCTGCCCCTTTGACTTCCATTGATCTATCACTCTCTTCCGGACAAGAAATTGTCATTGAGGAGAGATCTCCCAAGGAATTGTTGAATGCACGTGGAGGACTTGGAGAGCCTGTTGCAGCCCCAGGAATTTCTGTGTGGAACCCCGCTTTTGATGTCACACCGGCTGGTCTGATTTCTGGCATCATCACAGAGAAGGGTGTCATTACCAAGACAAGTGATGACGCATTCGACATAAAAGCTTTCGCACAGAAGACAGGGGTTGGGAATCCAATGGACAAGTGTCCTTTGCCATTAAAAAGTAACACCCATGAGAATAAGAAGAGGGTGTTATCTGGGAAGGAAGCATTGGTGAAGCTTTTAAGATGGCATTTTGGTTACCCTGATTTTAGGGGCAAGCAATTAGAGGCTATTCAAGCTGTACTTTCAGGAAGAGATTGCTTTTGTCTTATGCCAACAGGAGGAGGGAAGTCATTATGTTATCAGATCCCTGCCTTGGCTAAAACAGGAATAGTTCTTGTTGTTTGTCCTTTAATAGGAGACCAGCTGTTGATTCTCACTTTTGATCTGCTTTTTAACTGA 1422 0.4437 MELHPITPLSICYKRCSLQLLDQRKLPLESVYLDILNSTDGWNAIKDMVVRGAPAIAIAAALSLAVEVFNLEAFNGSPADAASFLGEKLDYLVSSRPTAVNLSDAVTKLKEVISKAVASTTEAKSVFQAYIEAAEIMLEDDVASNRAIGSYGASIIQQQTGKRKLSVLTHCNTGSLACGGYGTALGIIRALHSEGVLERAYCTETRPFNQGSRLTAYELVHEHIPGTLIADSAAAALMKAGRVDAVVVGADRVTSNGDTANKIGTYSVALCAKFHNVPFYVAAPLTSIDLSLSSGQEIVIEERSPKELLNARGGLGEPVAAPGISVWNPAFDVTPAGLISGIITEKGVITKTSDDAFDIKAFAQKTGVGNPMDKCPLPLKSNTHENKKRVLSGKEALVKLLRWHFGYPDFRGKQLEAIQAVLSGRDCFCLMPTGGGKSLCYQIPALAKTGIVLVVCPLIGDQLLILTFDLLFN 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g1264 473 FunFam Methylthioribose-1-phosphate isomerase 163 360 - -
Lele18g1264 473 Gene3D - 375 464 IPR027417 -
Lele18g1264 473 Gene3D - 198 363 IPR042529 -
Lele18g1264 473 Pfam Initiation factor 2 subunit family 50 350 IPR000649 GO:0044237
Lele18g1264 473 Hamap Putative methylthioribose-1-phosphate isomerase [mtnA]. 8 360 IPR005251 -
Lele18g1264 473 SUPERFAMILY NagB/RpiA/CoA transferase-like 10 353 IPR037171 -
Lele18g1264 473 TIGRFAM eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 38 351 IPR011559 GO:0044249
Lele18g1264 473 FunFam Methylthioribose-1-phosphate isomerase 7 197 - -
Lele18g1264 473 Pfam DEAD/DEAH box helicase 414 457 IPR011545 GO:0003676|GO:0005524
Lele18g1264 473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 394 459 IPR027417 -
Lele18g1264 473 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 9 364 - -
Lele18g1264 473 Gene3D - 8 197 IPR027363 -
Lele18g1264 473 TIGRFAM salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 10 351 IPR005251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g1264 Lele-ChrLele18 9592120 9599658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g1264 47 365 Eukaryotic Initiation Factors Gene Family AT2G05830 77.812 7.27e-173 487