Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g1248 ATGGAGGAGGAGGAGAAAGAGAAAGAAGTGCGGTACCGTGGTGTCCGCCGGCGGCCATGGGGGAAGTTTGGAGCGGAGATAAGAGACCCGAGAAAGCAAGGGTCAAGGTTGTGGTTGGGGACATTTGAGAGAGCTGAAGAAGCAGCAAGAGCTTATGACCAAGCAGCTTACAACTTTAGAGGACAGCTTGCAGTTCTTAACTTCCCCGAACACTTCAATCTTCCTCCGCCGCCGCCATCTCAACCATTCTCTTCTTCTTCATCGTCTTCTTCTTATGGAGCTGGTGACATTACTGCAAGTTCCTCAACAACTACGGCTGCTGAAGAACAACACTTGCAAAGGGAAGTTATTGAGTTTGAGTGTTTGGATGATAAGGTATTAGAAGAGCTTCTTGAATCTCTAGAGAAGAAGAACAACAAACAAGATTGA 429 0.4709 MEEEEKEKEVRYRGVRRRPWGKFGAEIRDPRKQGSRLWLGTFERAEEAARAYDQAAYNFRGQLAVLNFPEHFNLPPPPPSQPFSSSSSSSSYGAGDITASSSTTTAAEEQHLQREVIEFECLDDKVLEELLESLEKKNNKQD 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g1248 142 MobiDBLite consensus disorder prediction 84 110 - -
Lele18g1248 142 ProSiteProfiles AP2/ERF domain profile. 11 69 IPR001471 GO:0003700|GO:0006355
Lele18g1248 142 PANTHER DNA-BINDING DOMAIN 4 136 IPR044808 GO:0003700|GO:0009873
Lele18g1248 142 PRINTS Ethylene responsive element binding protein signature 12 23 IPR001471 GO:0003700|GO:0006355
Lele18g1248 142 PRINTS Ethylene responsive element binding protein signature 35 51 IPR001471 GO:0003700|GO:0006355
Lele18g1248 142 Coils Coil 124 142 - -
Lele18g1248 142 SUPERFAMILY DNA-binding domain 11 70 IPR016177 GO:0003677
Lele18g1248 142 Gene3D AP2/ERF domain 10 71 IPR036955 GO:0003700|GO:0006355
Lele18g1248 142 CDD AP2 11 71 IPR001471 GO:0003700|GO:0006355
Lele18g1248 142 Pfam AP2 domain 11 61 IPR001471 GO:0003700|GO:0006355
Lele18g1248 142 FunFam Ethylene-responsive transcription factor 2 10 70 - -
Lele18g1248 142 MobiDBLite consensus disorder prediction 69 110 - -
Lele18g1248 142 SMART rav1_2 11 75 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g1248 Lele-ChrLele18 9423163 9423591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g1248 7 137 AP2-EREBP Transcription Factor Family AT3G23230 54.348 6.61e-42 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele18g1248 AP2 1e-12 CL0081