Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g1235 ATGGGGAATAGAAAGAAAAACAACCGCTCACGTTCGAAACAATCTAAGTCAAAGTCGGGTACCAGTTCTAGTCACAATACTCAAGCCAACACACCTGAAGTTAAATGGTCTGATGAAAGGCCAGAGTCATCCCAATCCGGGAACAAAAGTGACAGCGATGACGAGACATTGGATGGCTCTGCTGCTGTCGAAATGCTTGAAGAAAAAGCAAAACCCGAAGACACTAACAAATCTGAGGAAACTAATATTACAGAAGGTGTTGAAGAATATGTAGATGCCTCTGCAGCAGTAAATATGCTTGAAGATGATCAAGCAAAACCCGAAGACACTAATAAATCTGAGGAAACTAATATTACACAAGGTGTTGAAGAATATGTAGATGCCTCTGCAGCTGTAAAAATGCTTGAAGATGATCAAGCAAAACCCGAAGACACTAATAAATCTGAGGAAACTAATATTACACAAGGTATTGAAGAATATGTAGATGCCTCTGCAGCTGTAAAAATGCTTGAAGATGATCAAGCAAAACCCGAAGACACTAATAAATCTGAGGAAACTAATATTACACAAGGTGTTGAAGTTGAAGGGTCTGTAGCAGATTCCATTTGGCCAAAATCAGATGACTCTAAGCGTGCACAACTCCTTCAGAAAATTCATGGAGGATTTGATATACTTATTAGACACAAATGTCTGGCTACTGGTCATCTTAACAAGGTCATTAAATTTTCCATGGATAAGATACAGGGACTTGCTGCTCGAGCTAAGCTCATGCAGCAACATTTAGACCGATCAGCAACGTGCATATGCTTTTTGGAAGCCCGCGAACTTGGGGAAATTTTCAAATTTTTGCTAGAACTAACTCATGCTTGTGGTTTGTCCATATGCGCTGATAAAAATGAGGCAAAAAAGAAGCGCCTTGCTGAGAAACGGAGAGATCTGAAAGAAGGAGCAGAAAGGTGTAAACTTGAGTTAGAGAAAGAGGAACCAAAAAGCTCAGAAATTGAGGCTCAACAAAAGGGATTTGCTGAGAAACAGAGAGATCTGAAAGAAGGAGAAATTGATGGGGAAGAAGAGAACAAAAAACTCTCAGAACAACTTGAAGAAAATGTGAAGTTAAAACGGCGCATATTAGATGAGGCGAAAAAGAAGCGCCTTGCTGAGAAACGGAGAGATCTGAACGAAGGAGCAGAAGGGTGTAAACTTGAGTTAGAGAAAGAGGAAGCAAAGAGCTCGGAAATTGAGGCTGAACAAAAGGGCCTTGCTGAGAAGCAGAAAGATCTGAAAGAAGGAGTAGAAAGGCGTAAACTTGAGTTAGAGAAAGAGGAAGCAAAGAGCTCAGAAATTGAGGCTGAACAAAAGGGCCTTGCTGAGAAACAGAGAGATCTGAAAGAAGGAGTAGAAAGGCGTAAACTTGAGTTAGAAAAAGTGGAAGCTAAACTTGCAGAAATTGAGGCTGAACAAAAGCGCCTTGCCGGGCAACACAGAGATCTAAAAGAAGAAGTAGAAAAGCGTAAACTTGAGTTAGAGAAAGAGGAAGCAAAGCTCTCAGAAATTGAGGCTGAATAA 1566 0.4061 MGNRKKNNRSRSKQSKSKSGTSSSHNTQANTPEVKWSDERPESSQSGNKSDSDDETLDGSAAVEMLEEKAKPEDTNKSEETNITEGVEEYVDASAAVNMLEDDQAKPEDTNKSEETNITQGVEEYVDASAAVKMLEDDQAKPEDTNKSEETNITQGIEEYVDASAAVKMLEDDQAKPEDTNKSEETNITQGVEVEGSVADSIWPKSDDSKRAQLLQKIHGGFDILIRHKCLATGHLNKVIKFSMDKIQGLAARAKLMQQHLDRSATCICFLEARELGEIFKFLLELTHACGLSICADKNEAKKKRLAEKRRDLKEGAERCKLELEKEEPKSSEIEAQQKGFAEKQRDLKEGEIDGEEENKKLSEQLEENVKLKRRILDEAKKKRLAEKRRDLNEGAEGCKLELEKEEAKSSEIEAEQKGLAEKQKDLKEGVERRKLELEKEEAKSSEIEAEQKGLAEKQRDLKEGVERRKLELEKVEAKLAEIEAEQKRLAGQHRDLKEEVEKRKLELEKEEAKLSEIEAE 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g1235 521 MobiDBLite consensus disorder prediction 14 34 - -
Lele18g1235 521 Pfam Protein of unknown function (DUF629) 140 306 IPR006865 -
Lele18g1235 521 Coils Coil 355 383 - -
Lele18g1235 521 MobiDBLite consensus disorder prediction 324 361 - -
Lele18g1235 521 MobiDBLite consensus disorder prediction 35 84 - -
Lele18g1235 521 Coils Coil 296 323 - -
Lele18g1235 521 PANTHER UBIQUITIN SPECIFIC PROTEINASE 107 317 - -
Lele18g1235 521 MobiDBLite consensus disorder prediction 1 121 - -
Lele18g1235 521 MobiDBLite consensus disorder prediction 396 461 - -
Lele18g1235 521 Coils Coil 389 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g1235 Lele-ChrLele18 9277427 9280601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g1235 126 293 C2H2 Transcription Factor Family AT3G47890 40.230 5.30e-26 111