Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g1208 ATGGCTTCTTACTTGATCTTAATCTCTCTTCTTCAACTAGCAATTCTGGCTAATCCTTGGTGGACCGGTCATCAGGTGGGGTTGCCGGGGATTGACCCGGATGCCAATTCACCGGCGGTGAACAAACGGCACAGTACCGACCTCTCTATCAACGAAAGCAGCGGGAAGAACAACAGTGGCGGTGATAGAGATGAAGATGATGATAGAGATGAACCCAAAGAAGGTGCAGTTGAAGTCGGAACTCGCAGACCTCGAGGCCGACCACCTGGTTCGAAGAACAAGCCGAAACCGCCCATCTTCGTGACCCGAGACAGCCCAAATGCCCTCCGAAGCCATGTCATGGAGGTCGCCGGCGGAGCCGATGTATCCGAAAGCGTAGCTCAGTTCGCTAGACGCCGTCAACGTGGGGTTTGTGTTCTTAGTGGAAGTGGCTCTGTCACCAACGTCACTCTTCGCCAACCTGCAGCTCCGGGAGCACTTGTAGCACTCCATGGAAGGTTTGAGATTCTATCCCTAACCGGATCCTTCTTGCCGGGTCCCGCACCACCCGGATCCACTGGACTCACGGTTTACCTCGCTGGAGGGCAAGGTCAGGTCGTGGGTGGAAGCGTGGTGGGGTCACTAGTAGCAGCAGGACCAGTGATGGTAATTGCTGCAACTTTTGCTAATGCAACTTATGAGAGATTACCTCTTGATGAGGAAGATGAAGGCGGCAACACGGCAGGGCAAGACGGTGGCAGCGGTGGAGGGTCTTCACCGCCACGGCCACAAGCGGGGATTGGAAGCAGTGGCGGCCACTTGCAGGGTGGGATTCCAGATCCTTCATCACTTCCTTTGTATAATCTGCCACCAAATCTGCTTCCCAACGGTGGTGGGCAGGTAGGTCATCATGAAGCTCTTGCTTGGGCAGCTCATGGAAGACAACCTTACTAG 933 0.5477 MASYLILISLLQLAILANPWWTGHQVGLPGIDPDANSPAVNKRHSTDLSINESSGKNNSGGDRDEDDDRDEPKEGAVEVGTRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVAGGADVSESVAQFARRRQRGVCVLSGSGSVTNVTLRQPAAPGALVALHGRFEILSLTGSFLPGPAPPGSTGLTVYLAGGQGQVVGGSVVGSLVAAGPVMVIAATFANATYERLPLDEEDEGGNTAGQDGGSGGGSSPPRPQAGIGSSGGHLQGGIPDPSSLPLYNLPPNLLPNGGGQVGHHEALAWAAHGRQPY 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g1208 310 CDD DUF296 110 193 IPR005175 -
Lele18g1208 310 MobiDBLite consensus disorder prediction 39 57 - -
Lele18g1208 310 MobiDBLite consensus disorder prediction 37 107 - -
Lele18g1208 310 Pfam Plants and Prokaryotes Conserved (PCC) domain 110 222 IPR005175 -
Lele18g1208 310 FunFam AT-hook motif nuclear-localized protein 109 236 - -
Lele18g1208 310 Gene3D - 109 236 - -
Lele18g1208 310 SUPERFAMILY AF0104/ALDC/Ptd012-like 106 234 - -
Lele18g1208 310 ProSiteProfiles PPC domain profile profile. 106 243 IPR005175 -
Lele18g1208 310 PIRSF ESCAROLA 31 310 IPR014476 GO:0003680
Lele18g1208 310 MobiDBLite consensus disorder prediction 232 294 - -
Lele18g1208 310 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 53 303 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g1208 Lele-ChrLele18 8939443 8940922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g1208 16 310 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 61.409 1.19e-100 295