Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g1206 ATGGAAGAAGACAGTACTGATCATGGTCGCCGTCATCATCAAGAAGAAGATGCAGAAGAATATGGATCTAAAGGCACATCATCAACTAACCGCTCTTATTATGGCTGCTCATTCTGCAAACAAGGCTTCACAAATGCACAGGCATTAGGAGGCCACATGAACATTCACAGAAAGCACAGAGTAATCAAGAAGAAAACCAAGCAAGGACAGGCCGTGATGCCGATGATGACGGCGGCTAAATCTTCCATGAACAAAGAGTTCAATAACGCCGATGAGTTTCTCAGGTATTACAGTTCCATTTTCCAGAATATAAACCCTAAGTGGTCTCAGTCCTTGAATAAGCAGGAGTTTGACCTGAATCTCCAAATTGGTTCAGCTCGTGATGTGGATGTTAATGGCGATAGATCAATGAATCTGGAAGAAGACAGTGAAGAAGTGGACTTGGAGCTCAGACTTGGTCACCATATATCCATCATAAGAACTTGA 486 0.428 MEEDSTDHGRRHHQEEDAEEYGSKGTSSTNRSYYGCSFCKQGFTNAQALGGHMNIHRKHRVIKKKTKQGQAVMPMMTAAKSSMNKEFNNADEFLRYYSSIFQNINPKWSQSLNKQEFDLNLQIGSARDVDVNGDRSMNLEEDSEEVDLELRLGHHISIIRT 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g1206 161 Gene3D Classic Zinc Finger 17 92 - -
Lele18g1206 161 PANTHER OS07G0101800 PROTEIN 13 155 - -
Lele18g1206 161 ProSiteProfiles Zinc finger C2H2 type domain profile. 34 61 IPR013087 -
Lele18g1206 161 ProSitePatterns Zinc finger C2H2 type domain signature. 36 56 IPR013087 -
Lele18g1206 161 MobiDBLite consensus disorder prediction 1 22 - -
Lele18g1206 161 SUPERFAMILY beta-beta-alpha zinc fingers 29 61 IPR036236 -
Lele18g1206 161 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g1206 Lele-ChrLele18 8898095 8898580 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g1206 34 153 C2H2 Transcription Factor Family AT5G43540 37.398 6.86e-16 68.6