Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g1199 ATGGAACGAGACCCTCTCGATTGGGCTCACATCTCTCTTCCACCATTCGCTCTTTCCGACGCCGACGATTTAATGGTCTGGGCAACCGATGGACGAGTCGCCAAATTCTGCTCCTGGGAACCTTACACAAGCAAAGATGCCGCCGTCGATTGCATCGAATGCATCCCCACCAATTTCTTGTGGTGCCAATCGATCTGCATCGGCGATCGCGCGATTGGCTCTGTTTCTGTTCAATCCTACTCGGGGAAGGATAAAGCGAGAGAGAAATCTGCTGAATTAGGGTATGTTTTAGGATCGGAGTATTGGGGGAAAGGGATCGCGACGAAGGTGGTGAAGATGATGGCGGAAATGGCGTTCGTTGAATTTCCATATCTGGAGAGGCTTGAAGCTCTGGTTGATGTTGAGAATGTGGGATCTCAGAGAGTTCTGGAGAAAGTTGGGTTCCAGAGGGAAGGAATTCTCAGCAAATTCTTGTTCATGAAAGAAAAATCCAGAGATACGGTTATGTTCAGTGTGCTTTCAGATGAAGTACGAGCTCGAATTGTTTGA 549 0.4827 MERDPLDWAHISLPPFALSDADDLMVWATDGRVAKFCSWEPYTSKDAAVDCIECIPTNFLWCQSICIGDRAIGSVSVQSYSGKDKAREKSAELGYVLGSEYWGKGIATKVVKMMAEMAFVEFPYLERLEALVDVENVGSQRVLEKVGFQREGILSKFLFMKEKSRDTVMFSVLSDEVRARIV 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g1199 182 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 11 166 IPR000182 GO:0016747
Lele18g1199 182 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 9 173 IPR016181 -
Lele18g1199 182 Gene3D - 1 178 - -
Lele18g1199 182 Pfam Acetyltransferase (GNAT) domain 12 149 IPR000182 GO:0016747
Lele18g1199 182 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 9 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g1199 Lele-ChrLele18 8799294 8799842 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lele18g1199 Acetyltransf_3 2.9e-24 CL0257