Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g1189 ATGACAAGTTTGAATCTGAAGGAGACGGAGCTGTGCCTAGGATTACCCGGCGGTGGTGGTGGTGGCAGTGAGCCGATGGAAACCACCGTCACTCCAAAGGCCTCAGGGAACAAGAGATCCTTCTCTGCAACTGTTGATCTCAAGCTCAACCTCGTCGATGATTCCAAGGATGATGCCGCCGGCGAAGAAGAAGATCTCACCAATCAAGACCACCACAAGAAGAATATCACCTCCTCCAAGAAGGACACAACTAAGCCACTTGCTAAGGCACAAGTGGTTGGTTGGCCTCCAGTGAGGTCATACAGGAAGAACGTGATGTCACATAATAATAAGGTGAGTAGTGAAGAGGGGAATACTGAGAAGAAGATGGTGGCTCCGGCTCCCGTGACCGGATCAGGATCATTTGTGAAGGTGTGTATGGATGGTGCACCATACCTTAGGAAGGTGGACTTGAACATGTACAAAAGCTACCAACAACTTTCTGATGCCTTGGCCAAAATGTTCAGCTCCTTCACCATGGGGAAGTATGAGGGGGCCCAAGGAATGATAGACTTCATGAATGAGAGCAAGTTGATGGATCTGCTGAACAGCTCTGAGTATGTGCCAGCCTATGAAGATAAAGATTGTGATTGGATGCTCGTTGGCGATGTCCCATGGGAGATGTTCGTTGATTCATGCAAGCGTCTCCGAATAATGAAAGGATCAGAAGCCATTGGATTGGCCCCAAGAGCCATGGAAAAATGCAAAAGCATCAGAAGCTGA 762 0.4856 MTSLNLKETELCLGLPGGGGGGSEPMETTVTPKASGNKRSFSATVDLKLNLVDDSKDDAAGEEEDLTNQDHHKKNITSSKKDTTKPLAKAQVVGWPPVRSYRKNVMSHNNKVSSEEGNTEKKMVAPAPVTGSGSFVKVCMDGAPYLRKVDLNMYKSYQQLSDALAKMFSSFTMGKYEGAQGMIDFMNESKLMDLLNSSEYVPAYEDKDCDWMLVGDVPWEMFVDSCKRLRIMKGSEAIGLAPRAMEKCKSIRS 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g1189 253 MobiDBLite consensus disorder prediction 55 89 - -
Lele18g1189 253 FunFam Auxin-responsive protein 129 244 - -
Lele18g1189 253 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 4 239 IPR003311 GO:0005634|GO:0006355
Lele18g1189 253 SUPERFAMILY CAD & PB1 domains 130 233 - -
Lele18g1189 253 Pfam AUX/IAA family 8 243 IPR033389 -
Lele18g1189 253 MobiDBLite consensus disorder prediction 65 80 - -
Lele18g1189 253 MobiDBLite consensus disorder prediction 1 38 - -
Lele18g1189 253 Gene3D - 129 246 - -
Lele18g1189 253 ProSiteProfiles PB1 domain profile. 133 234 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g1189 Lele-ChrLele18 8705986 8708160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g1189 114 242 B3 DNA Binding Superfamily AT4G23980 30.597 4.72e-08 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele18g1189 AUX_IAA 9.2e-84 CL0072