Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g1178 ATGCGCATTTTGTCCCGTGACACTCTGTGGGTTGCTCCTTCCTTTTCGCTCCCTCTTCTCTCGTCAACCCACTCAGTCATGGAACCAGGCGCCCCTCAGCCGCCGCCAGCACCACCGCCAACGCCGCCGACACTCCCGTCACCTCCGGCCTCACCCTCTCCCTCCTCCACCGTCACCATCCTCGGAAAGTACCAGTTGATCCGTCTCCTAGGTCGTGGCAGCTTCGCCAAGGTTTACCAGGCTCGATCTTTAATCGATGGCTCCATCGTCGCCGTGAAGATCATCGACAAGTCGAAAACTGATGCCGCCATGGAGCCTCGGATTGTTCGGGAGGTTGATGCAATGCGACGGCTTCACGACCATCCGCATGTTCTGAAAATCCATGAGGTTTTGGCTTCGAAGACGAAGATCTACCTGATAGTGGAGTTTGCTGCCGGCGGGGAGTTATTCTCGAAGATCTCGCGTAAAGGCCGATTGACGGAGCCGGTGGCGCGGCGTTACTTTCAGCAATTGGTTTCTGCCCTCTGTTTCTGCCACAAAAACGGCGTCGCACACCGGGATTTGAAGCCTCAGAATCTTCTTTTGGACCACGAAGGGAATCTGAAGGTCTCTGATTTCGGACTGTCCGCCTTACCGGAACAGCTTAAAAATGGTTTGCTCCACACTGCTTGTGGCACCCCGGCTTATACAGCGCCGGAGATCCTCTTCCGGCGCGGATACGACGGCTCGAAAGCCGACGCGTGGTCGTGCGGGCTTATACTCTACGTACTGATCGCCGGCTACCTCCCTTTCTCCGACGCCAACATCCCTGAGATGTGCAAGAAGATCAGCCGGCGCGATTACCAGTTCCCGGAGTGGATATCCAAACCGGCCCGGTTCGTGATTAACCGACTACTCGAACCGAATCCGAAGAATCGGATGAGTCTAGAATCACTCTATCAAAACTCGTGGTTCAAGAAATCGCTAAAGCCTCAACCCAACGAGAGCTTATTCGAGTCGGGTCCCACGGCGAAATCGTATCAAAAGCTGGAAAGAATGGCTTCAGGCGTGAGCGCCTTCGACATAATCTCCATGTCGTCAGGTTTGGACCTGACGGGGTTGTTTGAAACGACGTCGGATAACAGGAGAGAAAAGAGATTCACAACGAGCGCTTCCCTGAAAGTAGTGGAAGAGAAAGTGAAGGAAGTAGGAGGAATTTTAGGATTCAAAGTTGAGATAGGTAAGAATGGAGCTATTGGATTTGGTAAAGGAAAGGTAATTCTTGTGGTGGAGGTGTTTGAGATAGTTCCTGAGTTGTTAATGGTGACAGTGAAAGTGATAAATGGTGGGTTTGAATTTGATGAGCTTCACTGGGGAGACTGGAAATCTGGGCTTCAAGATGTTGTTCTTTCATGGCACAATGAATCACTGTGA 1413 0.5209 MRILSRDTLWVAPSFSLPLLSSTHSVMEPGAPQPPPAPPPTPPTLPSPPASPSPSSTVTILGKYQLIRLLGRGSFAKVYQARSLIDGSIVAVKIIDKSKTDAAMEPRIVREVDAMRRLHDHPHVLKIHEVLASKTKIYLIVEFAAGGELFSKISRKGRLTEPVARRYFQQLVSALCFCHKNGVAHRDLKPQNLLLDHEGNLKVSDFGLSALPEQLKNGLLHTACGTPAYTAPEILFRRGYDGSKADAWSCGLILYVLIAGYLPFSDANIPEMCKKISRRDYQFPEWISKPARFVINRLLEPNPKNRMSLESLYQNSWFKKSLKPQPNESLFESGPTAKSYQKLERMASGVSAFDIISMSSGLDLTGLFETTSDNRREKRFTTSASLKVVEEKVKEVGGILGFKVEIGKNGAIGFGKGKVILVVEVFEIVPELLMVTVKVINGGFEFDELHWGDWKSGLQDVVLSWHNESL 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g1178 470 ProSiteProfiles NAF domain profile. 345 369 IPR018451 GO:0007165
Lele18g1178 470 SMART serkin_6 64 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g1178 470 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Lele18g1178 470 Gene3D Phosphorylase Kinase; domain 1 67 148 - -
Lele18g1178 470 MobiDBLite consensus disorder prediction 24 56 - -
Lele18g1178 470 SUPERFAMILY Protein kinase-like (PK-like) 60 332 IPR011009 -
Lele18g1178 470 FunFam Non-specific serine/threonine protein kinase 55 347 - -
Lele18g1178 470 CDD CIPK_C 352 459 - -
Lele18g1178 470 Pfam Protein kinase domain 64 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g1178 470 CDD STKc_AMPK-like 63 317 - -
Lele18g1178 470 Gene3D Kinase associated domain 1, KA1 346 463 - -
Lele18g1178 470 FunFam Non-specific serine/threonine protein kinase 57 148 - -
Lele18g1178 470 ProSitePatterns Protein kinases ATP-binding region signature. 70 93 IPR017441 GO:0005524
Lele18g1178 470 MobiDBLite consensus disorder prediction 29 53 - -
Lele18g1178 470 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 58 438 - -
Lele18g1178 470 Pfam NAF domain 351 405 IPR004041 GO:0007165
Lele18g1178 470 ProSiteProfiles Protein kinase domain profile. 64 318 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g1178 470 Gene3D Transferase(Phosphotransferase) domain 1 149 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g1178 Lele-ChrLele18 8535297 8536709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g1178 45 467 CBL-interacting serine-threonine protein kinases AT4G14580 58.005 3.39e-165 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele18g1178 Pkinase 1.9e-68 CL0016