Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g1158 ATGGTACTGAGATTGTGTTCAAAGTACTATGATGCTTCTGGCAACCTGAAAGATCTTGACAGTGACAAAATGATGGTGTTTGAGCAAATCATACAAGGAATGGCGGCCAGCAGCCTTAGGTGTATTGCTTTTGCACATACAGAAGTAGCTGAAGAAGATGAAGAAGGAACCCAAAAGGTAAAAGAACAAGGGCTCACCCTGTTAGGTTTTGTGGGTATTAAGGATCCATGTCGTCCAGGTGTCAAGAAATCTGTAAAAGATTGCCAACAAGCAGGAGTAAATGTCAAGATGATCACAGGAGACAATGTTTTCACAGCCAAAGCCATAGCCACAGAATGCGGCATCCTCCAGCCTAATCAAGACGCAACAGAAGCAGTCATTGAAGGAGAAGTGTTTCGAAACTTGTCTCCCGAGGAAAGACTAAAGAGAGTGGAGAAAATTTCTGTGATGGCGCGATCCTCCCCATTTGACAAGCTCCTTATGGTTCAATGCCTCAAACAGAAAGGGATAACCATAGTGCTTCAGGTGTTAATGGTGGAGTTTCTGAAGAAATTTGCAGACACCGAGAGGTTGAATTGGGGGCAGTGGGGTGTTTGCATTTTAATGGCGGCTATTTCTTGGCCTATTGGCTGGCTTATCAAGTTCATTCCGGTCCCAACAAAACCGTTGCTCAGTTTCTTGAGCTTGAAGAAGCACTGA 699 0.4435 MVLRLCSKYYDASGNLKDLDSDKMMVFEQIIQGMAASSLRCIAFAHTEVAEEDEEGTQKVKEQGLTLLGFVGIKDPCRPGVKKSVKDCQQAGVNVKMITGDNVFTAKAIATECGILQPNQDATEAVIEGEVFRNLSPEERLKRVEKISVMARSSPFDKLLMVQCLKQKGITIVLQVLMVEFLKKFADTERLNWGQWGVCILMAAISWPIGWLIKFIPVPTKPLLSFLSLKKH 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g1158 232 Pfam haloacid dehalogenase-like hydrolase 58 146 - -
Lele18g1158 232 Gene3D - 77 169 IPR023214 -
Lele18g1158 232 SUPERFAMILY HAD-like 62 169 IPR036412 -
Lele18g1158 232 Pfam Cation transporting ATPase, C-terminus 170 216 IPR006068 -
Lele18g1158 232 SUPERFAMILY Calcium ATPase, transmembrane domain M 170 218 IPR023298 -
Lele18g1158 232 Gene3D - 2 76 IPR023299 GO:0000166
Lele18g1158 232 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 2 81 IPR023299 GO:0000166
Lele18g1158 232 PANTHER CATION TRANSPORTING ATPASE 169 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g1158 Lele-ChrLele18 8219237 8220577 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g1158 180 232 Primary Pumps ATPases AT3G22910 67.925 2.73e-20 87.4