Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g1156 ATGTCTATGCCCTTCGTCACCAATTTGGAGCGAATACAGACACTTTTGAATGCACCTCACAATCATAGCAAACCAAACAAAAAATGGCATTCTGCATTTGTTAGTATATATTGCTACAGAGCTCTCTTGTCTCACTTCAAATCCACTTTGCTTCCCACCACCACCATCAACAACACGTCTAAGTTATCTCCTTCCTCCTCCTTCGCTGTCATCGATTTAAACACAGATCATTCCTTCAGCGTTACTCAAACCACCCTCACCCATCTCGTTAAGGACAAAGATGTAGAAGCACTCCGGAGTCTTGGTGGGGTCCACGGCGTGGCCTCTGCTCTGAAAACCGACGTGGATCATGGAGTCAAAGGCGGTGATGATGATGATGATCCCCATGACCTCATGCGACGGCGCGACGCGTTTGGTTCTAACACCTACCCGAAACCACCTACGAGAGGGTTCTTTCATTTTGTGATTGAAGGCTTCAAGGACCCCACCATTCTCATTCTATTGGTCTGTGCTGCTCTGTCTCTTGGCTTCGGCATCAAGGAGAATGGAATCAATGAAGGCTGGTACGAAGGTGGAAGCATCTTCGTTGCAGTTTTTCTCGTCATTGCTGTATCTTCCATCAGCAACTTCAGACAGAGTAGACAATTCGACAAGTTGTCCCAGGTTAGCAACAACATCCAAGTGGATGTTGTACGAAGTGGTCGTCGGCAACAAGTTTCGATATACGACATCGTCGCGGGTGATGTTGTTTTGCTGAAGATTGGAGACCAAGTTCCTGCTGATGGCTTGTTCTTGGAAGGCCATTCTCTGCAAGTTGATGAGTCCAGCATGACAGGTGAGAGCGACCACGTAGAGATTAATGGCGACAAGAACCCATTTTTGTTTTCTGGGACAAAGGTGGCTGATGGGTTTGCCAAAATGCTCGTTACTTCCGTTGGCACGAACACGGCATGGGGTCAAATGATGGGTTCCATAAGCAGAGACAACAATGAAGAAACCCCATTGCAAGAACGCCTCAATAAGCTTACTTCTGCGATAGGCAAGGTTGGTTTGGCTGTGGCTTTTCTTGTTCTTGTTGTTATGTTAGTTCGATACTTCACAGGGAACACAACCGATGAGAATGGGAACAAAGAGTTCAACGGAAACAGAACCAAGTTTAATGACATAATGAACGGAGTTGTGAGAATTATTGCTGCTGCTGTAACTATTGTGGTGGTTGCGATACCAGAAGGGCTTCCTTTGGCTGTGACTTTGACACTTGCTTATTCCATGAAGAAGATGATGGCTGATATGGCTATGGTGAGGAAGCTCTCTGCTTGCGAGACTATGGGCTCTGCTACAACCATTTGTACAGATAAGACGGGGACACTCACGCTTAATCAGATGAAAGTGACGAAGTTCTGGCTTGGACAAGAACCTATGGAAGAGAAACCTCTTGAATCTTCAGTTCATTCAGGTGTTCTTCAACTGATCAAAGAAGGGGTTGCGCTTAACACTACAGGTAGTGTTTACAAGTCTAATAAATCAACAACTTCTGAATATGAGCTTTCAGGTAGTCCAACAGAGAAGGCCATTCTTTCGTGGGCTGTTCTTGATTTGAACATGAACATGGAGGAATTGACGCAAAGTTGTGCCATTCTTCATGTCGAAGCCTTCAATTCCAAGAAGAAGAGAAGTGGGGTTTTGACTAAAAGCAAGGCAGACAACAGAATCCATGCACATTGGAAAGGTGCGGCCGAGATGGTACTGAGATTGTGTTCAAAGTACTATGATGCTTCTGGCAACCTGAAAGATCTTGACAGTGACAAAATGATGGTGTTTGAGCAAATCATACAAGGAATGGCGGCCAGCAGCCTTAGGTGTATTGCTTTTGCACATACAGAAGTAGCTGAAGAAGATGAAGAAGGAACCCAAAAGGTAAAAGAACAAGGGCTCACCCTCTTAGGTCTTGTGGGTATTAAGGATCCATGTCGTCCAGGTGTGAAGAAAGCTGTAAAAGATTGCCAACAAGCAGGAGTAAATGTCAAGATGATCACAGGAGACAATGTTTTCACAGCCAAAGCCATAGCCACAGAATGCGGCATCCTCCAGCCTAATCAAGACGCAACAGAAGCAGTCATTGAAGGAGAAGTATTTCGAAACTTGTCTCCCGAGGAAAGACTAAAGAGAGTGGAGAAAATTTCTGTGATGGCGCGATCCTCCCCATTTGACAAGCTCCTTATGGTTCAATGCCTCAAACAGAAAGGTCATGTAGTTGCAGTCACAGGAGATGGCACAAATGATGCACCGGCGCTAAAAGAAGCTGATATAGGACTTTCCATGGGGATTCAAGGCACTGAGGTTGCAAAGGAAAGCTCGGATATAGTTATCTTGGATGATAATTTCGCCTCAGTTGCCACCGTTCTAAAGTGGGGAAGATGTGTCCATAGCAACATCCAAAAGTTCATTCAGTTTCAACTGACTGTAAACGTTGCAGCTCTTGTAATTAACTTTGTGGCTGCAGTATCCGCAGGAGAAGTGCCATTAACAGCAGTTCAACTATTGTGGGTGAACCTCATAATGGACACTTTGGGTGCTTTGGCTCTAGCAACAGAAAAGCCTACTATGGAGTTATTGGATAAACCACCTGTAGGTAGAACTGAGCCACTCATCACCAACATCATGTGGAGGAATCTCTTAGCCCAAGCTTTATACCAGATCACAATTCTTCTGACATTACAGTTCAAGGGTGAAGATATATTTGGGGTGAGTTCAGAGGTAAATGACACTTTGATTTTCAACACATTTGTGTTATGCCAAGTGTTTAATGAATTCAATGCAAGGAAGCTGGAGAAGAAGAATGTGTTTCAGGGGATTCACAAGAACAAGTTGTTTATGGGGATCATAGGGATAACCATAGTGCTTCAGGTGTTAATGGTGGAGTTTCTGAAGAAATTTGCAGACACCGAGAGGTTGAATTGGGGGCAGTGGGGTGTTTGCATTTTAATGGCGGCTATTTCTTGGCCTATTGGCTGGCTTATCAAGTTCATTCCGGTCCCAACAAAACCGTTGCTCAGTTTCTTGAGCTTGAAGATGAAAGGAATACTTGGTTGGAGAAGTTTATGA 3105 0.4454 MSMPFVTNLERIQTLLNAPHNHSKPNKKWHSAFVSIYCYRALLSHFKSTLLPTTTINNTSKLSPSSSFAVIDLNTDHSFSVTQTTLTHLVKDKDVEALRSLGGVHGVASALKTDVDHGVKGGDDDDDPHDLMRRRDAFGSNTYPKPPTRGFFHFVIEGFKDPTILILLVCAALSLGFGIKENGINEGWYEGGSIFVAVFLVIAVSSISNFRQSRQFDKLSQVSNNIQVDVVRSGRRQQVSIYDIVAGDVVLLKIGDQVPADGLFLEGHSLQVDESSMTGESDHVEINGDKNPFLFSGTKVADGFAKMLVTSVGTNTAWGQMMGSISRDNNEETPLQERLNKLTSAIGKVGLAVAFLVLVVMLVRYFTGNTTDENGNKEFNGNRTKFNDIMNGVVRIIAAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADMAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTKFWLGQEPMEEKPLESSVHSGVLQLIKEGVALNTTGSVYKSNKSTTSEYELSGSPTEKAILSWAVLDLNMNMEELTQSCAILHVEAFNSKKKRSGVLTKSKADNRIHAHWKGAAEMVLRLCSKYYDASGNLKDLDSDKMMVFEQIIQGMAASSLRCIAFAHTEVAEEDEEGTQKVKEQGLTLLGLVGIKDPCRPGVKKAVKDCQQAGVNVKMITGDNVFTAKAIATECGILQPNQDATEAVIEGEVFRNLSPEERLKRVEKISVMARSSPFDKLLMVQCLKQKGHVVAVTGDGTNDAPALKEADIGLSMGIQGTEVAKESSDIVILDDNFASVATVLKWGRCVHSNIQKFIQFQLTVNVAALVINFVAAVSAGEVPLTAVQLLWVNLIMDTLGALALATEKPTMELLDKPPVGRTEPLITNIMWRNLLAQALYQITILLTLQFKGEDIFGVSSEVNDTLIFNTFVLCQVFNEFNARKLEKKNVFQGIHKNKLFMGIIGITIVLQVLMVEFLKKFADTERLNWGQWGVCILMAAISWPIGWLIKFIPVPTKPLLSFLSLKMKGILGWRSL 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g1156 1034 Gene3D - 447 800 IPR023214 -
Lele18g1156 1034 SFLD Haloacid Dehalogenase 432 808 - -
Lele18g1156 1034 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 456 661 IPR023299 GO:0000166
Lele18g1156 1034 Gene3D - 157 1010 - -
Lele18g1156 1034 PRINTS H+-transporting ATPase (proton pump) signature 755 771 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele18g1156 1034 PRINTS H+-transporting ATPase (proton pump) signature 787 812 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele18g1156 1034 PRINTS H+-transporting ATPase (proton pump) signature 607 625 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele18g1156 1034 SUPERFAMILY Calcium ATPase, transduction domain A 225 324 IPR008250 -
Lele18g1156 1034 Pfam E1-E2 ATPase 227 428 - -
Lele18g1156 1034 SUPERFAMILY Calcium ATPase, transmembrane domain M 102 1012 IPR023298 -
Lele18g1156 1034 PRINTS P-type cation-transporting ATPase superfamily signature 273 287 - -
Lele18g1156 1034 PRINTS P-type cation-transporting ATPase superfamily signature 450 464 - -
Lele18g1156 1034 PRINTS P-type cation-transporting ATPase superfamily signature 649 660 - -
Lele18g1156 1034 PRINTS P-type cation-transporting ATPase superfamily signature 671 681 - -
Lele18g1156 1034 PRINTS P-type cation-transporting ATPase superfamily signature 755 774 - -
Lele18g1156 1034 PRINTS P-type cation-transporting ATPase superfamily signature 779 791 - -
Lele18g1156 1034 Pfam Cation transporter/ATPase, N-terminus 102 174 IPR004014 -
Lele18g1156 1034 SFLD p-type atpase 432 808 IPR044492 -
Lele18g1156 1034 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 391 490 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele18g1156 1034 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 726 836 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele18g1156 1034 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 194 367 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele18g1156 1034 FunFam Calcium-transporting ATPase 650 800 - -
Lele18g1156 1034 FunFam Calcium-transporting ATPase 772 1014 - -
Lele18g1156 1034 SMART Cation_ATPase_N_a_2 103 179 IPR004014 -
Lele18g1156 1034 Pfam Cation transporting ATPase, C-terminus 840 1010 IPR006068 -
Lele18g1156 1034 FunFam Calcium-transporting ATPase 460 656 - -
Lele18g1156 1034 Gene3D - 131 326 - -
Lele18g1156 1034 CDD P-type_ATPase_Ca_PMCA-like 133 888 - -
Lele18g1156 1034 FunFam Calcium-transporting ATPase 198 326 - -
Lele18g1156 1034 PANTHER CATION TRANSPORTING ATPASE 67 1012 - -
Lele18g1156 1034 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 78 1012 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Lele18g1156 1034 SUPERFAMILY HAD-like 448 860 IPR036412 -
Lele18g1156 1034 Pfam haloacid dehalogenase-like hydrolase 447 769 - -
Lele18g1156 1034 ProSitePatterns E1-E2 ATPases phosphorylation site. 452 458 IPR018303 -
Lele18g1156 1034 Gene3D - 460 656 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g1156 Lele-ChrLele18 8197039 8200143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g1156 12 1026 Primary Pumps ATPases AT3G22910 67.973 0.0 1319