Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g1153 ATGAAGCTTCTTCAGTCAGAGGAAACCGCCTCCGAGGCTTGCCACTTCCCTGAGGAAACCCAAGAAGAGAAACCCCCGAGTTCTTCTGTGGTTGAAGGCAATGACCGTAGCCCTGATAATGGTGATGCGGTTGTCGATGTCTTCGGGAAAACCGTGGAGTTCCCGGTATTGGAGAACGCAGAAGACTCCGTTGAGGGCTTGTATTTTTATAAGAATGTTTACAATTTGATCCCCAAGTCTCTGGGAGGTTTTGCACGGTTGAAGACATTGAAGTTCTTCGGGAATGAGATTAATTTGTTTGCCCCGGAGTCTGGAAACTTGACGGGCTTGGAGTGCTTGCAGATGAAGATATCTTCTCCTGGGATTGGTGGGTTGCCATTGCATAAGTTGAAGGGTTTGAAGGAGTTAGAGTTGTCCAAAGTGCCTCCACGGCCTTCTGCTTTCCCTATATTGACCGAGATTTCTGGTCTTAAGTCCTTGACCAAGCTATCTATTTGCCACTTTTCTATAAGATACCTTCCTCCTGAAATTGGCCTCTTAAAGGAACTGGAGTATCTTGATCTTTCATTCAACAAGATGAAGACATTGCCATCCGAAATCAGTTATTTGAATGGCTTGATATCTTTGAAAGTTTCCAATAATAAGTTGGTGGAACTACCATCAACTATGGCCTTGCTGTCTGGGTTGGAGAACTTGGACCTGTCAAATAATAGGTTGACTTCATTGGGGCCTCTTGAACTTGGGTCTATGCATAAACTTCAGAATTTAAATCTTCAGTTCAATAAGCTGCACAACACACTTCAAATACCTTCATGGATCTGCTGTAATATGGAAGGAAATGACAAAGGTGAATGCAGTGATGATGTTAGCAGTTCTTCTGTTGAAATGGATGTCTATGAAACTAGTTCACTGGAGAATGATGGACTACTTTCACATGCATCTCGTAATAGCTCATCAAACCTATTGATTAGCTCCTCATCTAGCAGTAGATGTTTTGCAACCCGGAAATCAGGTAAAAGGTGGAAGCGGCGGCATTACTTACAGCAGAAAGCCCGTCAAGAGTGCTTAAACAACAGCAGGAAGTGGAAAGGTTTAAATAATTCCCAACAGAGCAAGGATATGCATAGCATTTGTGAATCAGAAAACCAAGGCAATCTTGCTCTTGAAAACTGCAGTGAAGCTCATTCATCAGACGGTGTGGGTCTGGACGATGAAGCTAGAAAGATGGTCTCAGAAGAAACTGGGAAAGACAGTGTAATTGATGATGTTAACAATAATGAAGTGGATATTGAAAAGCAGTTTTCTAAGGATTGCTGTTCTAGTGAAAGTGAGGATGAAAAAGATGTTAACAATAAAGGTGCTTCCTTATGCCCCTTGGAGAATGGACCTAGTGGACAGGACAATGCATCAAGTACAGAATCTTTGAAGCATATTTCTAAATCAAAGAGACATTCAGAAAGGGATCTTGATAATCCTAAACCATGCAAGTCTAGAAAACCAATTGGTGATAGCTCATCATTGTCCTACAAGTATAGTAGATTATCATTTTGTGGCACCAAAGACCATCTGCCAGATGGCTTTTATGATGCTGGGCGTGATCGACCTTTTGTGCCTCTTGAGAGTTATGAGCAAAATCAGTGTCTTGCCTCTCGTGAAGTTATCTTATTAGACAGAGAAAGGGATGAAGAGCTGGATGCCATCACACTCTCTGCTCAGTCATTGGTGTTTCATTTGAAGCAGTTAAATGATTTTACCAAACATGGGAATCAAGCTGCTCTTGATAGCTTCCAGGTTGCTTCACTGCTTGCACTCTTTGTATCAGATCATTTTGGGGGCAGTGATAGAGGTGCTATCGTAGAACGGACACGAAAATTAGTGTCTGGTTCAAACTATCACAAACCTTTTTTCTGTACATGCTCAACTGGAAGCAACAGTGATATTAGTGCTTCCTCTAAACCAGTTGTGAACAGTGTAGAAGACATTACTCTTGCTAATATCTGTGAAAAATCTCTCAAGTCTATAAAAAGAAGACAAAGCTCGATTATAGTTCCCATTGGATCTGTGCAGTTTGGTGTGTGTAGACATAGAGCTCTGCTTTTCAAGTATTTATGTGATCGCATGGAGCCTCCAGTACCTTGTGAGCTTGTTAGGGGTTTCTTGGATTTTTCACCACATGCCTGGAACACCATCGTAGTTAACAGAGGTGATACTCAGGTTAGAATGTTGGTTGATGCATGCCGGCCGCATGATATAAGAGAAGAGGAAGACCCTGAGTTCTTTTGCAGGTACATACCTCTTAGTCGAACCAAAGTTCCTATTTCCCCTGATGGAACTCCTGGTCCTGGTTGTTCATTTCCATCTCTCTCTACGTGTGACAAATTTGGTAAGGCATCTTCAAGTACTTTAGTTCGGTGCAAATTTGGGTCAATTGAGGCTGCAGCAAAGGTGCGTACCTTGGACTTGAAGGAGAGTTGTTCACCAGACAAATTAAAAAACTTCGAATATAATTGTTTGGGAGAAGTGAGAATTTTAGGTTCTCTGAAACATCCCTCCATAGTTGAAATGTATGGACATCAAATATCTTACAAGTGGACTCTTTCAGAGGATGGTAATCCTGAGCATTGTGTATTAAGGGCTGCAATTTTTATGGAGCACATAGAAGGGGGCTCTTTGAGAACCTATCTTGATAAGTTATCAAAAGCTGGTGAAAAGCATGTTCCAGTAGAGCTGGCTTTTTATATTGCCAAAGATGTTGCGTGTGCATTGTCAGAGCTGCACTCGAAGCACATAATTCATCGCGATGTAAAAAGTGAAAACATTCTGATTGCTTTGGATAGAAAGAAAGATGATGGCACCCCTACTGTGAAGCTTTGTGATTTTGACAGTGCAGTGCCACTAAGATCACCTTTGCATAGTTGCTGTATTGCTCATGTGGGAACACCTCCTCCTTATGTATGCACTGGAACACCACGATGGATGGCTCCCGAGGTTATGCGGACTATGTATAAAGAAAATACTTATGGGTTGGAAGTTGATATTTGGTCATTTGGATGCTTACTTCTGGAGCTTCTCACACTGCGTATTCCATATTCTGGGCTATCCGATTTACAATTCCATGATATTTTACAGATGGGTAAACCACCACAGTTAACCGAAGAACTGGAGGCCCTGAGTTCACCGAATGAACCCACTATGATTCGATCCAATGATGAGCCGGAAAAATCAGATACCGAGGTAAACGTGATGAAATTCCTTGTTGATTTGTTTCACAAGTGTGTGGAAGAAAATCCAGCCAAACGTCCTACGGCCAAAAAAATCTACGAAATGCTGCTTGAACAAACGGACCGTCTAAAAGTACAAGATGTTGGGAAGAGTTAG 3378 0.4189 MKLLQSEETASEACHFPEETQEEKPPSSSVVEGNDRSPDNGDAVVDVFGKTVEFPVLENAEDSVEGLYFYKNVYNLIPKSLGGFARLKTLKFFGNEINLFAPESGNLTGLECLQMKISSPGIGGLPLHKLKGLKELELSKVPPRPSAFPILTEISGLKSLTKLSICHFSIRYLPPEIGLLKELEYLDLSFNKMKTLPSEISYLNGLISLKVSNNKLVELPSTMALLSGLENLDLSNNRLTSLGPLELGSMHKLQNLNLQFNKLHNTLQIPSWICCNMEGNDKGECSDDVSSSSVEMDVYETSSLENDGLLSHASRNSSSNLLISSSSSSRCFATRKSGKRWKRRHYLQQKARQECLNNSRKWKGLNNSQQSKDMHSICESENQGNLALENCSEAHSSDGVGLDDEARKMVSEETGKDSVIDDVNNNEVDIEKQFSKDCCSSESEDEKDVNNKGASLCPLENGPSGQDNASSTESLKHISKSKRHSERDLDNPKPCKSRKPIGDSSSLSYKYSRLSFCGTKDHLPDGFYDAGRDRPFVPLESYEQNQCLASREVILLDRERDEELDAITLSAQSLVFHLKQLNDFTKHGNQAALDSFQVASLLALFVSDHFGGSDRGAIVERTRKLVSGSNYHKPFFCTCSTGSNSDISASSKPVVNSVEDITLANICEKSLKSIKRRQSSIIVPIGSVQFGVCRHRALLFKYLCDRMEPPVPCELVRGFLDFSPHAWNTIVVNRGDTQVRMLVDACRPHDIREEEDPEFFCRYIPLSRTKVPISPDGTPGPGCSFPSLSTCDKFGKASSSTLVRCKFGSIEAAAKVRTLDLKESCSPDKLKNFEYNCLGEVRILGSLKHPSIVEMYGHQISYKWTLSEDGNPEHCVLRAAIFMEHIEGGSLRTYLDKLSKAGEKHVPVELAFYIAKDVACALSELHSKHIIHRDVKSENILIALDRKKDDGTPTVKLCDFDSAVPLRSPLHSCCIAHVGTPPPYVCTGTPRWMAPEVMRTMYKENTYGLEVDIWSFGCLLLELLTLRIPYSGLSDLQFHDILQMGKPPQLTEELEALSSPNEPTMIRSNDEPEKSDTEVNVMKFLVDLFHKCVEENPAKRPTAKKIYEMLLEQTDRLKVQDVGKS 1125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g1153 1125 MobiDBLite consensus disorder prediction 1 40 - -
Lele18g1153 1125 Gene3D Ribonuclease Inhibitor 51 286 IPR032675 -
Lele18g1153 1125 ProSiteProfiles Leucine-rich repeat profile. 182 203 IPR001611 GO:0005515
Lele18g1153 1125 Pfam Protein kinase domain 822 1108 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g1153 1125 SMART serkin_6 788 1117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g1153 1125 ProSiteProfiles Leucine-rich repeat profile. 228 249 IPR001611 GO:0005515
Lele18g1153 1125 PRINTS Leucine-rich repeat signature 226 239 - -
Lele18g1153 1125 PRINTS Leucine-rich repeat signature 183 196 - -
Lele18g1153 1125 FunFam Leucine-rich repeat protein kinase family protein 835 1116 - -
Lele18g1153 1125 FunFam Leucine-rich repeat protein kinase family protein 53 296 - -
Lele18g1153 1125 SMART LRR_bac_2 226 245 - -
Lele18g1153 1125 SMART LRR_bac_2 180 199 - -
Lele18g1153 1125 SMART LRR_bac_2 203 222 - -
Lele18g1153 1125 Pfam Leucine rich repeat 206 263 IPR001611 GO:0005515
Lele18g1153 1125 MobiDBLite consensus disorder prediction 476 497 - -
Lele18g1153 1125 Gene3D Transferase(Phosphotransferase) domain 1 788 1123 - -
Lele18g1153 1125 SUPERFAMILY Protein kinase-like (PK-like) 788 1111 IPR011009 -
Lele18g1153 1125 MobiDBLite consensus disorder prediction 441 505 - -
Lele18g1153 1125 Pfam Ethylene-responsive protein kinase Le-CTR1 663 744 - -
Lele18g1153 1125 SMART LRR_typ_2 250 276 IPR003591 -
Lele18g1153 1125 SMART LRR_typ_2 226 249 IPR003591 -
Lele18g1153 1125 SMART LRR_typ_2 180 203 IPR003591 -
Lele18g1153 1125 PANTHER SERINE/THREONINE-PROTEIN KINASE SBK1 110 1114 - -
Lele18g1153 1125 MobiDBLite consensus disorder prediction 461 475 - -
Lele18g1153 1125 ProSiteProfiles Protein kinase domain profile. 788 1110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g1153 1125 ProSitePatterns Serine/Threonine protein kinases active-site signature. 930 942 IPR008271 GO:0004672|GO:0006468
Lele18g1153 1125 SUPERFAMILY L domain-like 62 278 - -
Lele18g1153 1125 SMART LRR_sd22_2 226 247 - -
Lele18g1153 1125 SMART LRR_sd22_2 180 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g1153 Lele-ChrLele18 8124137 8131643 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g1153 825 1108 MAP Kinase Kinase Kinase AT1G63700 27.719 4.35e-23 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-2 Lele18g1153 Pkinase 6.5e-39 CL0016