Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g1144 ATGAACGCCGGCACAGCCACCTTCCGCTCCATTCTCGACAAACCCCTCAGTCAGCTCACCGAGGATGACATTTCCCAGCTCACCCGCGAAGATTGTCGCAGGTTCCTCAAAGAAAAAGGAATGCGTCGGCCTTCTTGGAACAAATCGCAGGCGATCCAGCAAGTTATTTCCCTCAAAGCTTTGCTCGACCCAGCTGACGACGATTCCGGCACCGGACCCGTACGGAGATTCCCTTTTGTTTCCGCTCAAGAAAATAACCCACCTGATAATCCAGATGTGACTGGTAGCGGTAGCGGCAGCGGCGGCGCTAATGTCGCCGGAGTTGAGGCGACATCGACTGGGCCGACAGAAGGGCCGGCTTTCCATGCTGCCGAAGAGCTTCCCAAATCCGTGTCTTCTGGAGAGAAACCAACTAACATTGAAACGAATGAGAAGGTCGTCAGTCCCAGAGAGTGTGCAACTAGTGGGCCTGTTGGGCAAATGACAATTTTCTATTGTGGTAAGGTGAATGTGTATGATGGGGTACCACCTGATAAGCCATATGTGGATTTGCAGGCACGGACAATCATGCAGCTTGCAGCCAGTCCCATCTATATACCTCAAGACGAACCTTTCAAAAGAAGTACATCAGTCTGGCCTTGTCATTTACAGATGGATAAAGAGACCCTTGTCCCAATTGATGCCACAATCTCTCAGTTTGCTCAAGCAGATAAGATGGTGGGGTATCCTTTGCATTACAGGGAGAAAGGGAGCACCACTCGTGATTCTGATGTAGATGGTCAGGCAAGCAGGAAAGTGTCATTGCAGCGATACTTAGACAAGCGAAAGGACAGGAGAAGATTAAAGATCAAGAAATTTGAGGGAGTAACTTCTTCTAACATGGAAATGTATTTCAGTCATCAAGTGAAGGCCCACGCCGCAAATGGGAATTCAAGCCGCAGTAGCACAAGCTCTCCGCCACAGCCAAGGCTGCCTCAATCTTCTGGTGGCTCAGCTGATAACCAGCCAAAGATTGGCCTTCCTGTTGATCTCAATCACAAAGCTAAGGAGCTGTTTGGTGCACTGTTAATGTTATCCCTCATTTCTTGGTATCTTATTCTTGGAAACCATGATATATATAATGTCCAAGAATCTGATAATATGATTTTCAAGAATGCTAAAACGTTGAACGGTCCTAAGACTGTGTCTGTGTCCCGCCATCGAAGAAGCTCGAGCTTCTCTCACAGCTTCTACCTTCTCTCTAACTCTTTCAAAGTTCAAACTACTTCAATGGCTGCCTTCCCGCTCACTTCCTTCATTTCTTCACCATCTCCGTGTCTCCTTCTTCGTTCTCGTTCCTCTGTTCCATTATTCAATCCCACCCATTTGCAGGCTTCAGTGATGCGAAATTGGAAGGTTGGAGCATTTTCTTTCAATGGCAGGGAGAGGAGAAATTTGGTGTCTGCAGCCGATCAAGATGGTCTGACAGATATTCTGAAAACTGAAAATCCTTACAAAGCTAAGGAAGATGAAGATAAGGCAGAGTTTGAAGCTCTGTTGCAAAACGGTAGTTGTGTAAAAGAAGTATGGGCTCAATTTGCCAAGGGAGTCTCTGGTGAATGGGACGGATTCGGAGCAGACTTCTCTAACGAAGGGAAGGCTATTGAATTACCAGAGCTGGTTGTCCCTGAAGCATTCCGAGAGTGGGAGGTTAAGGTATTTGATTGGCAAACTCAGTGTCCCACTCTTGCTGAATCAGAGGAGAACATTCTTACATACAAGAACATTCTGTTGCTTCCTACTGTTGGTTGTGAGGCCGATGCCGCCACGAGATACAAGGTGGATGAAAGGCAAGTGGGAGGAGTAAATGGTGGGGCTATTGCCTTTGCTTATCAAACCAGTGGATGTTATGTTGCTGTCTGGCAGAAGGAGGATGAACTATTGGAGCTGGAATACTGCTTGATCAATCCTCAAGACCCTGAGTCACGAGTGAGGATCATTCAGTTTGTCCGTGTATCGGATAACACAAACATGGCGCTACAGAGAATCAAAGTATTTCGCGAGCAATGGTATGGACCATTTAGGAATGGTGAACAACTAGGAGGTTGCGCCATCCGTGATTCTGCATTCGCTTCTACTGCTCCCGTGACTGCTTCACTAGTTGCTGGTATTTGGCATGGGTCCAAAGCTGTTGCCACCATGGGCACTTCAAATACTGGGATCTTTCACGAGCTTTCGGGTGACAACATTCAGAACTGTGTCAGAGATGGATGCAGCGAGATATTACTTCCTAAACAATTGTGGTGTTCATTTAATCAAAACAAGGATGGGGAAGCTCTTAGTGAAGTGGGATGGCTTCTTGATCATGGACAGGCAATCAAATCAACCTGCCTGTTTTCAAGCACTGCAAAACCCAAGGAAATATCAATAGCATTAGAAACAAAGTGTTCCGAAGATGTATAG 2442 0.4668 MNAGTATFRSILDKPLSQLTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQVISLKALLDPADDDSGTGPVRRFPFVSAQENNPPDNPDVTGSGSGSGGANVAGVEATSTGPTEGPAFHAAEELPKSVSSGEKPTNIETNEKVVSPRECATSGPVGQMTIFYCGKVNVYDGVPPDKPYVDLQARTIMQLAASPIYIPQDEPFKRSTSVWPCHLQMDKETLVPIDATISQFAQADKMVGYPLHYREKGSTTRDSDVDGQASRKVSLQRYLDKRKDRRRLKIKKFEGVTSSNMEMYFSHQVKAHAANGNSSRSSTSSPPQPRLPQSSGGSADNQPKIGLPVDLNHKAKELFGALLMLSLISWYLILGNHDIYNVQESDNMIFKNAKTLNGPKTVSVSRHRRSSSFSHSFYLLSNSFKVQTTSMAAFPLTSFISSPSPCLLLRSRSSVPLFNPTHLQASVMRNWKVGAFSFNGRERRNLVSAADQDGLTDILKTENPYKAKEDEDKAEFEALLQNGSCVKEVWAQFAKGVSGEWDGFGADFSNEGKAIELPELVVPEAFREWEVKVFDWQTQCPTLAESEENILTYKNILLLPTVGCEADAATRYKVDERQVGGVNGGAIAFAYQTSGCYVAVWQKEDELLELEYCLINPQDPESRVRIIQFVRVSDNTNMALQRIKVFREQWYGPFRNGEQLGGCAIRDSAFASTAPVTASLVAGIWHGSKAVATMGTSNTGIFHELSGDNIQNCVRDGCSEILLPKQLWCSFNQNKDGEALSEVGWLLDHGQAIKSTCLFSSTAKPKEISIALETKCSEDV 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g1144 813 MobiDBLite consensus disorder prediction 63 140 - -
Lele18g1144 813 MobiDBLite consensus disorder prediction 83 111 - -
Lele18g1144 813 MobiDBLite consensus disorder prediction 303 338 - -
Lele18g1144 813 SMART tify_2 154 195 IPR010399 -
Lele18g1144 813 Pfam tify domain 160 194 IPR010399 -
Lele18g1144 813 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 9 302 IPR040390 -
Lele18g1144 813 MobiDBLite consensus disorder prediction 303 334 - -
Lele18g1144 813 Pfam Jas motif 261 278 IPR018467 -
Lele18g1144 813 ProSiteProfiles Tify domain profile. 154 189 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g1144 Lele-ChrLele18 8030370 8043689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g1144 1 307 Tify Gene Family AT4G14720 48.889 7.73e-72 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lele18g1144 tify 1.8e-10 No_clan