Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g1135 ATGGCCTCTCATCATCATCATCGTCTTCCTCCTTTACCATTCTCTGTTATCTTCTTCCTCATTTTTCTTCTCTCCATTGTCAATCCTTCTCACCAAGCTTCTTCTTCTTCTTCTTCTAATGCCAGCCTCCCATTAAACCCTAGACTCATCAAAGCTTACTATGCTCTTCAAGCATGGAAGCATTCCATCACTTCTGATCCCAAGAACTTCACCTCCAACTGGTACGGCTACCATGTCTGCAACTACCACGGCGTCTACTGTGCTCCGGCACCCGACGACCCCCACGTCTACACAGTCGCCGGCATCGACCTCAACCACGGCAACATCTATGGTTCCTTGCCGGAAGACCTAGGTCTCCTCACCGACCTTTCTCTCTTCCACCTTAACTCCAACCGATTCTGTGGGACCCTCCCTCAGAGCTTCCGTAATCTTCATCTTCTCCATGAGCTTGATGTCAGTAACAACCAGCTCTCCGGTCCGTTCCCCGACGTCGTTTTGTGTCTCCGTTCTTTGAAGTTCTTGGACATTAGGTTCAACTCCTTCCATGGCAAGGTCCCTTCCGATCTCTTTGAGCTCAAACTCGATGCCGTTTTCATAAACGACAACAAGTTTAAGTTCTCGTTGCCGGAGAATCTCGGGAAGTCTCCGGTATCTGTGTTGGTCTTTGCGAACAATAATCTTAATGGGTGTGTTCCGGCGAGCTTGGGGAAAATGAAGGGCACGCTTAACGAGATTATAATTTCGAACAGTGGGTTAAAGGGTTGTTTGCCGGAGGAGATTGGTAAATTGGATCAGGTTACCGTGTTTGATGTGAGTGGTAATAAGTTGGTCGGGACATTGCCGGAATCTATTGGGGGGATGAAGAAGTTGGAGCAGTTGAATGTTGCGCATAACGAGCTCTCCCGTGAGATTCCGGCTAGTGTGTGCTCGTTGCCGAGGTTGCAGAATTTCACCTACTCTTATAATTACTTCTGCAGTGAACCGGCTACCTGTCTGAACTTGCCGGACGAAGATGATCGGAAAAATTGCATTCCGTACCGGCCGATGCAGAGGTCGGAAATGGAATGTAAAGCTTTTTATGCTCACCCAGTTGATTGTGGTGCCTTTAGATGCTCAAGGCGGCCGCCTCCGCCTCCGCCGCCTCCTTCTCCTCCTCCTCCATCACCACCTCCGCCCCCTCCTCCTCCACCTCCACCACCACCACCTCCACCTCCACCTCCACCTCCGGCAGTTCACCATTATTATCCGTGA 1251 0.5028 MASHHHHRLPPLPFSVIFFLIFLLSIVNPSHQASSSSSSNASLPLNPRLIKAYYALQAWKHSITSDPKNFTSNWYGYHVCNYHGVYCAPAPDDPHVYTVAGIDLNHGNIYGSLPEDLGLLTDLSLFHLNSNRFCGTLPQSFRNLHLLHELDVSNNQLSGPFPDVVLCLRSLKFLDIRFNSFHGKVPSDLFELKLDAVFINDNKFKFSLPENLGKSPVSVLVFANNNLNGCVPASLGKMKGTLNEIIISNSGLKGCLPEEIGKLDQVTVFDVSGNKLVGTLPESIGGMKKLEQLNVAHNELSREIPASVCSLPRLQNFTYSYNYFCSEPATCLNLPDEDDRKNCIPYRPMQRSEMECKAFYAHPVDCGAFRCSRRPPPPPPPPSPPPPSPPPPPPPPPPPPPPPPPPPPPAVHHYYP 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g1135 416 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 25 412 - -
Lele18g1135 416 MobiDBLite consensus disorder prediction 371 416 - -
Lele18g1135 416 Pfam Leucine rich repeat N-terminal domain 54 87 IPR013210 -
Lele18g1135 416 FunFam Leucine-rich repeat extensin-like protein 1 53 214 - -
Lele18g1135 416 SUPERFAMILY L domain-like 53 335 - -
Lele18g1135 416 Gene3D Ribonuclease Inhibitor 52 214 IPR032675 -
Lele18g1135 416 Gene3D Ribonuclease Inhibitor 215 343 IPR032675 -
Lele18g1135 416 MobiDBLite consensus disorder prediction 372 416 - -
Lele18g1135 416 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 240 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g1135 Lele-ChrLele18 7939176 7940426 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g1135 46 371 Leucine-rich Repeat extension Gene Families AT3G22800 68.196 5.48e-159 454