LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele18g1135	ATGGCCTCTCATCATCATCATCGTCTTCCTCCTTTACCATTCTCTGTTATCTTCTTCCTCATTTTTCTTCTCTCCATTGTCAATCCTTCTCACCAAGCTTCTTCTTCTTCTTCTTCTAATGCCAGCCTCCCATTAAACCCTAGACTCATCAAAGCTTACTATGCTCTTCAAGCATGGAAGCATTCCATCACTTCTGATCCCAAGAACTTCACCTCCAACTGGTACGGCTACCATGTCTGCAACTACCACGGCGTCTACTGTGCTCCGGCACCCGACGACCCCCACGTCTACACAGTCGCCGGCATCGACCTCAACCACGGCAACATCTATGGTTCCTTGCCGGAAGACCTAGGTCTCCTCACCGACCTTTCTCTCTTCCACCTTAACTCCAACCGATTCTGTGGGACCCTCCCTCAGAGCTTCCGTAATCTTCATCTTCTCCATGAGCTTGATGTCAGTAACAACCAGCTCTCCGGTCCGTTCCCCGACGTCGTTTTGTGTCTCCGTTCTTTGAAGTTCTTGGACATTAGGTTCAACTCCTTCCATGGCAAGGTCCCTTCCGATCTCTTTGAGCTCAAACTCGATGCCGTTTTCATAAACGACAACAAGTTTAAGTTCTCGTTGCCGGAGAATCTCGGGAAGTCTCCGGTATCTGTGTTGGTCTTTGCGAACAATAATCTTAATGGGTGTGTTCCGGCGAGCTTGGGGAAAATGAAGGGCACGCTTAACGAGATTATAATTTCGAACAGTGGGTTAAAGGGTTGTTTGCCGGAGGAGATTGGTAAATTGGATCAGGTTACCGTGTTTGATGTGAGTGGTAATAAGTTGGTCGGGACATTGCCGGAATCTATTGGGGGGATGAAGAAGTTGGAGCAGTTGAATGTTGCGCATAACGAGCTCTCCCGTGAGATTCCGGCTAGTGTGTGCTCGTTGCCGAGGTTGCAGAATTTCACCTACTCTTATAATTACTTCTGCAGTGAACCGGCTACCTGTCTGAACTTGCCGGACGAAGATGATCGGAAAAATTGCATTCCGTACCGGCCGATGCAGAGGTCGGAAATGGAATGTAAAGCTTTTTATGCTCACCCAGTTGATTGTGGTGCCTTTAGATGCTCAAGGCGGCCGCCTCCGCCTCCGCCGCCTCCTTCTCCTCCTCCTCCATCACCACCTCCGCCCCCTCCTCCTCCACCTCCACCACCACCACCTCCACCTCCACCTCCACCTCCGGCAGTTCACCATTATTATCCGTGA	1251	0.5028	MASHHHHRLPPLPFSVIFFLIFLLSIVNPSHQASSSSSSNASLPLNPRLIKAYYALQAWKHSITSDPKNFTSNWYGYHVCNYHGVYCAPAPDDPHVYTVAGIDLNHGNIYGSLPEDLGLLTDLSLFHLNSNRFCGTLPQSFRNLHLLHELDVSNNQLSGPFPDVVLCLRSLKFLDIRFNSFHGKVPSDLFELKLDAVFINDNKFKFSLPENLGKSPVSVLVFANNNLNGCVPASLGKMKGTLNEIIISNSGLKGCLPEEIGKLDQVTVFDVSGNKLVGTLPESIGGMKKLEQLNVAHNELSREIPASVCSLPRLQNFTYSYNYFCSEPATCLNLPDEDDRKNCIPYRPMQRSEMECKAFYAHPVDCGAFRCSRRPPPPPPPPSPPPPSPPPPPPPPPPPPPPPPPPPPPAVHHYYP	416

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele18g1135	416	PANTHER	LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED	25	412	-	-
	Lele18g1135	416	MobiDBLite	consensus disorder prediction	371	416	-	-
	Lele18g1135	416	Pfam	Leucine rich repeat N-terminal domain	54	87	IPR013210	-
	Lele18g1135	416	FunFam	Leucine-rich repeat extensin-like protein 1	53	214	-	-
	Lele18g1135	416	SUPERFAMILY	L domain-like	53	335	-	-
	Lele18g1135	416	Gene3D	Ribonuclease Inhibitor	52	214	IPR032675	-
	Lele18g1135	416	Gene3D	Ribonuclease Inhibitor	215	343	IPR032675	-
	Lele18g1135	416	MobiDBLite	consensus disorder prediction	372	416	-	-
	Lele18g1135	416	FunFam	LRR receptor-like serine/threonine-protein kinase ERECTA	240	327	-	-

Showing 1 to 9 of 9 entries

Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele18g1135	Lele-ChrLele18	7939176	7940426	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele18g1135	46	371	Leucine-rich Repeat extension Gene Families	AT3G22800	68.196	5.48e-159	454

Showing 1 to 1 of 1 entries