Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g1134 ATGACGAGCACTTCATCTTTTAGGGTTTTTGTGCTCTTAGTATTACGGCCGCTCGCAGTCTCCACGCTCCCCGTTACCCCTCCAGCCATGGCCGTCGGGAAGAACAAGCGCATTTCCAAAGGGAAGAAAGGAGGAAAGAAGAAGGCAGCTGATCCATTTGCCAAGAAGGATTGGTATGATATCAAGGCTCCTTCTGTTTTCCAAGTTAAAAGTGTGGGCAAAACTCTCGTCACTCGTACTCAGGGTACCAAGATTGCCTCAGAGGGACTGAAGCACAGAGTGTTTGAGGTCTCATTGGCTGATCTTCAAAATGATGAGGACCACGCATACAGGAAGATTAGGTTGAGAGCTGAGGATGTTCAAGGGAAGAATGTTCTCACAAATTTCTGGGGAATGGACTTCACGACTGATAAGTTGAGGTCATTGGTTCGCAAATGGCAAACTTTGATTGAAGCTCATGTGGACGTGAAGACCACCGATAACTACACATTGAGGATGTTCTGCATTGGGTTCACCAAGAGGCGTTCCAACCAGGTTAAGAGGACCTGCTATGCCCAATCAAGCCAGATCAGACAGATCCGCAGGAAGATGAGGGAGATCATGACTAACCAGGCAACATCCTGCGATTTGAAAGAGTTGGTCCGCAAGTTCATCCCCGAGATGATTGGAAAGGAGATTGAAAAGGCAACATCTAGCATCTATCCTTTGCAAAACGTGTTCATTCGCAAGGTCAAGATCTTGAAGGCTCCTAAGTTTGATCTCGGAAAACTAATGGAGGTTCATGGAGATTATTCAGAAGATGTTGGTGTGAAGGTAGACAGACCTGCAGATGAGACAATGGCTGAGGCTCCCACCGAAATCGTTGGAGCTTAA 873 0.4685 MTSTSSFRVFVLLVLRPLAVSTLPVTPPAMAVGKNKRISKGKKGGKKKAADPFAKKDWYDIKAPSVFQVKSVGKTLVTRTQGTKIASEGLKHRVFEVSLADLQNDEDHAYRKIRLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIGFTKRRSNQVKRTCYAQSSQIRQIRRKMREIMTNQATSCDLKELVRKFIPEMIGKEIEKATSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYSEDVGVKVDRPADETMAEAPTEIVGA 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g1134 290 Hamap 40S ribosomal protein S1 [RPS3A]. 30 287 IPR027500 GO:0003735|GO:0005840|GO:0006412
Lele18g1134 290 ProSitePatterns Ribosomal protein S3Ae signature. 90 102 IPR018281 GO:0003735|GO:0005840|GO:0006412
Lele18g1134 290 PANTHER 40S RIBOSOMAL PROTEIN S3A 27 282 - -
Lele18g1134 290 Pfam Ribosomal S3Ae family 45 250 IPR001593 GO:0003735|GO:0005840|GO:0006412
Lele18g1134 290 SMART Ribosomal_S3Ae_2 44 250 IPR001593 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g1134 Lele-ChrLele18 7924515 7926658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g1134 30 290 Cytoplasmic Ribosomal Protein Gene Family AT4G34670 87.405 6.99e-167 461