Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g1131 ATGGATTCGGTAGTCGGTGTTGGAACACCGAAGATGGATTTGGAAACAGGTGCTCTGGATTCCAAGATGCAAGGTGTTGGAAATGTTAGCAGTAATGATAAAATTTTCAGAGCTGATAAAATTGATCTGAAAAGTTTGGATGCTCAGCTTGACAAGCACTTAAGCAGGGTTTGTTCCAGGAACATTGAATCCAAAAGGCCTAAAGAAGAGTGGGAGATTGATTTGGCCAAATTGAATCTGCGATATGTTGTAGCACATGGGACCTATGGTACTGTTTACAGAGGCACCTATGATAACCAAGATGTTGCAGTGAAAGTTTTGGACTGGGGTGATGATGGTGTCGCCACAGCTTCTGAAACGGCTGCTTTACGCGCATCATTTCGGCAGGAGGTTGCTGTTTGGCACAAACTTGACCATCCAAATGTTACAAAATTTGTTGGAGCTTCAATGGGAACCTCAAATCTTAAGATTCCCGCAAAGAACTCTTCAAGTGATGGTCAAGATTCCCATCCTTCTAGGGCATGTTGTGTTGTTGTTGAGTATATTCCCTGTGGGACACTAAAACAATTATTGTTCAAACAGAGATATAAGAAACTTGCTTTCAAGGTTGTGATCAAGCTGGCTTTAGATCTTGCAAAGGGTCTTAGCTATCTACATTCAAAGAAGATTGTACATCGTGATGTCAAAGCGGAGAATATGTTGCTAGATGGCCATGGAAACTTGAAAATAGCCGATTTTGGAGTTGCACGAGTTGAAGCACAAAATCCGAGTGACATGACTGGTGAAACTGGAACCCTTGGATATATGGCACCAGAGGTTCTGGATGGTAAGCCTTACAACAGAAGATGTGATGTGTACAGCTTTGGCATTTGCTTGTGGGAAATATATTGCTGTGATATCCCTTATCCAGATCTTAGCTTCGCTGACGTGTCATCGGCGGTTGTCCGTCAGAATTTGCGACCGGAAATCCCGCGATGTTGTCCGACAGCTTTGGCAAACATAATGAGGAAGTGCTGGGATGGGAACCCAGACAAGCGTCCAGAAATGGGGGAGATGGTGAGTTTGTTGGAAGCCATAGATACAAGCAAAGGAGGAGGAATGATACCAGAAGATGCCAAGCCCACCTGCTTCTGTTTTGCTCCATCTCGTGGTCCCTAA 1158 0.4404 MDSVVGVGTPKMDLETGALDSKMQGVGNVSSNDKIFRADKIDLKSLDAQLDKHLSRVCSRNIESKRPKEEWEIDLAKLNLRYVVAHGTYGTVYRGTYDNQDVAVKVLDWGDDGVATASETAALRASFRQEVAVWHKLDHPNVTKFVGASMGTSNLKIPAKNSSSDGQDSHPSRACCVVVEYIPCGTLKQLLFKQRYKKLAFKVVIKLALDLAKGLSYLHSKKIVHRDVKAENMLLDGHGNLKIADFGVARVEAQNPSDMTGETGTLGYMAPEVLDGKPYNRRCDVYSFGICLWEIYCCDIPYPDLSFADVSSAVVRQNLRPEIPRCCPTALANIMRKCWDGNPDKRPEMGEMVSLLEAIDTSKGGGMIPEDAKPTCFCFAPSRGP 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g1131 385 Gene3D Phosphorylase Kinase; domain 1 67 160 - -
Lele18g1131 385 Pfam Protein tyrosine and serine/threonine kinase 80 356 IPR001245 GO:0004672|GO:0006468
Lele18g1131 385 PRINTS Tyrosine kinase catalytic domain signature 217 235 IPR001245 GO:0004672|GO:0006468
Lele18g1131 385 PRINTS Tyrosine kinase catalytic domain signature 179 192 IPR001245 GO:0004672|GO:0006468
Lele18g1131 385 PRINTS Tyrosine kinase catalytic domain signature 283 305 IPR001245 GO:0004672|GO:0006468
Lele18g1131 385 PRINTS Tyrosine kinase catalytic domain signature 327 349 IPR001245 GO:0004672|GO:0006468
Lele18g1131 385 SMART serkin_6 78 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g1131 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Lele18g1131 385 FunFam Kinase suppressor of Ras 1 67 162 - -
Lele18g1131 385 CDD STKc_MAP3K-like 84 356 - -
Lele18g1131 385 Gene3D Transferase(Phosphotransferase) domain 1 184 367 - -
Lele18g1131 385 SUPERFAMILY Protein kinase-like (PK-like) 63 356 IPR011009 -
Lele18g1131 385 ProSiteProfiles Protein kinase domain profile. 78 359 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g1131 385 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 56 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g1131 Lele-ChrLele18 7890441 7894446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g1131 27 385 MAP Kinase Kinase Kinase AT3G22750 79.167 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lele18g1131 PK_Tyr_Ser-Thr 5e-58 CL0016