Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g1109 ATGAGATCAGCTGGCCATTCCGGGGTTGTAGTGAATGACAGAAACTCCTCGGGCTGTTTAATTGTTAGAAAGCAAGGAGATGGAGTGGGTGGTGGATTTGGTTCTTCGAGCAGCTCGCGGAAGCTTTATGAATCGAAGGTTAGGAAAAGGCCCAGTGTAGCTGAGAGTGATTCAGAATCAAGCGGTGAGTTGCTGATGCCTCCAATGAGAAGGCTTGGTTCTGAGACTATTCGTGTCTGCAATGGGTTGACTGCTTTTGAGCGGGCTATAGGAGAAAGGAGTGAAATTGGTAGAAAGAGGGATAGAACGGAGCAAATCAGACGTAATGAGGATTCTGTGTTTGATAAGAATGGTTTGGAGCGGAGAGAAACGAAGAGGAATAAACTGGACGTGTTTAATTTTGATGAATATGATGATGGTTTCGATGTGCAAATGACTCAAAGTAGGAAATCTGATGGGGATAATGGAGTTAGTTTTGGAGGAAGAAGGTTTATGGAACCAATGCATGCTGCTTCTAGTGGCATTGAGAGGGAATCTGAAACAGGGTCAGGTAGACACATTGTTTATAGTAGAAGGAATTCTTATTATGACAGGGCTAGTAGCTTTTATCTAGGAGATAATAGTAATCAGAGCAGGTTAAAAGGAAAGAGGGGTGATGCTCAACTACCTCTGTCTTTGCTGAAAAATAAGTTTAAATCAGATGAATCCATCCGGGTTCAGGGGAAAAATGGTGTTCTAAAGGTGATGGTTAATAAGAAGAAGGAGGCTGGCCTGTTAGAGCACTATGGTCATCGCAAACCTATGGAAAGCAGACAGAGTTTAAGAATTGACGCCACTGCCAAGAAGAACCCCCGAGTCCATCCTTCATCGTACTCAGAAACAAAACTTGTTCAGAAGCCTGGTTTAGTTGCTAGGCAAGAGAAAAAACGGATAGCATCAAAAAAGTCATTTTCAACTAAGCACAATAAGGCCCGTGCTTGGGGTACAGAAGACAGTGACTTGTCATTGAATCAGGAGTTAGAAACTTCTAAAACTTGCAAGTCTTTGAAGAGGTCAGGTTCTGAGGAGGAACAGACTCCTTTGCGTGAGAAACTCCCAACTAAAATCATGAAAGAAGGGAAAGTAAGGCGGGGTAGTGGCACCGAAAAGCAGAAGCTGCGAGAAAAACTAAGGGAGATGCTACTGAGTGCAGGATGGACTATAGATTATCGGCCTCGGAGGAATAGAGACTATCTGGATGCAGTTTACATTAATCCAGGGGGTACAGCCTATTGGTCTATCATCAAAGCCTATGATGCTCTGCAAAAGCAATTGAATGGTGGTGATGACGAGGCCAACCCCATGGGTTATGGTTCTTCCTTTGCTCACATCTCAGATGAGATGTTGGGTCAATTAACAAGAAAAACTCAGAAAAAGATGGAGAGAGAATTGAAGAAGAAGAAAATCGATGGTAGTGAGAGCGAGAGCGAGAGTGATAGTGAAAGAGAAACCAACCGTAAGGGATCTGCCAGGGACAAGCACGATAAGAATAGCACAGATATTGATAGCAATGAAGAGAAATTAAGCTCTTTTATAAAGCAGGGAAGTAAGTCATTGAAAAACAAGATGACAGAAAATGCTGTTGCCAGTGCTAGCTTTAAATCCCAGAAATCTACCAGGCGCAAACACGATGAAACTGACAAGTCATTATCTGAATGTGATACCCATCTGTCACATGGAAGGAAAAGTAGAAAACATGGAAGATGTACTTTGTTAGTTGGGAGTTCTAGCAAGGGATTGAATTCAGAATCTGGTGGTTTTGTTCCATATACTGGCAAAAGAACAGTGCTTTCCTGGTTGATTGACTCTGGGACAGTTTCTTTGAGCCAAAAGGTTCAGTATCGGAGACGGAAACGAGTACTGCTGGAGGGATGGATTGCAAGTGATGGCATTCATTGTGGCTGCTGCAGTAAAATCCTCACAATTTCCAAGTTTGAGATTCATGCAGGTAGCAAATTGCGCCAGCCATTTCGAAACATATATTTGGATTCGGGAGTTTCTCTTCTACAATGTCAAATAGATGCATGGAATAAACAAGAGAATTCTGAGAAAATTAGTTATCATTCTGTGGATATTGATGGTGATGATCCAAATGATGACACTTGCGGTATATGTGGAGATGGTGGGGCCTTAATCTGCTGTGATGGTTGTCCATTAACATTTCATCAGAGCTGCTTGGGTATTCAGATGCTTCCTCCTGGTGAATGGCATTGCCCAAATTGCACCTGCAAATTTTGTGGAATAGCCATTGGGACTGTTAAAAAAGGAGGTGCTGCTGCATATGATCTACATACTTGTAACTTTTGTGAGAAAAAATACCATGAATCTTGTGCTGAGAAGATGGATGCCCTTTCTATTAAATCCAACACATCATGCTTTTGTTTCTGTGGAAGAGAGTGCAAACAGCTTTTTGAGCATTTGAAGAAGTACCTAGGTACCAACCATGAGCTAGAGGCAGGATTTTCATGGTCTCTTATTCATAGAACAGACGAAGACTCAGAGGCAGCTAGTAGAGGAATTTTTCAAAGGGTGGAATGCAACTCCAAGCTAGCTGTTGCACTGACTATCATGGATGAATGCTTTTTACCTGTTGTTGACCGGAGGAGTGGGATCAATTTAATTCATAATGTTTTATATAATAGTGGGTCAAACTTCAGTAGGTTGAATTATAATGGTTTTTACACTGCTATTCTGGAGAGGGGTGATGAAATAATTTCTGCAGCATCTATCAGGTTCCATGGGACTAGGATAGTGGAGATGCCATTTATTGGAACTTGCCATATACATAGGCATCAGGGCATGTGCCGCCGGCTTTTTTCTGCTATTGAATCGGCCCTCCGCTCGATGAAGGTTGAGATAATGATTATTCCAGCAATTGCTGAACTCATGCAAACATGGACAAAGAATTTTGGCTTCACACATCTTGAGGAATCACTGAGGCAAGAACTGAGGTTTTTGAATATTCTGGTGTTCCCTGGTATAAATATGCTACAGAAGGTGCTAGTAGAGAAAGGAAACTTTGAGGGAAACACAACTGCCTCAGGTGTTGAGAAAATGGAAAATGGAGACGAAGTTAGTATTAAGCCAAAATTGGCCGACGGGTCAGATGATTCCTCAAATCAACAAGATCCTGATGGAAGTGATAATGCTGGTTCAAATCCTGTCAATGAGATAAATGATGAATGTACTGTTGCTTCTCAGGAGATGAAGGGTCAGGTTTTATCCGACAGGACAGTGTGCTCCAAATCTCAGTCCGAGGATATGCTATCTGACTCGGCTTCAGATAAATGTTCTTCTCCGTCTGGTACAAATCATGTTGCACCGGAGACGGAAAATCCAGTGAAAGATAATTTGCATACACCTGGCAAAAGTCAGGTCATTTCTCCGAACGATACTTCTATTGATGCACATCGATCAGATGCTCCGGATTGCCCTGAAAATTGTGGTTTGGTCCCGGAAACTGCTCCCTCTGATCCTAATTTGACAGAAGACCTGGTTGAACCTATCTCTGACCAGAAAAGTCACTTGCCCACTGCTGTAAATGGTGATTCATCTGAGAATGAGATGAATCCAGATCACAAGGCTGTTCCTTCATGTGGGTTACCTGAAGAAGATATTACCATACGGAGCGATGAAAATGCAGATGAGTCTGATTCTATACTCAATCATGCTGATGAGAGTTCCTTGCAAATCGTTTCAGATAAGTCTGATTCTATACTCAATCATGCTGATGAGAGTTCCTTGCAAATCAGTTCAGGTTTGAATAATAATACTCCTGAGGTTCGTAAGGCTGTTCCTTCAGGTGGGTCATCTGAAGAAAATATTACCACAGGGAGCTATGAAAATGCAGATATGTCTGATTTTATACTCAATCATGCTGATGAGAGTTCCTTTCAAATCAGTTCAGGCTTGAATAGTGAAACTGTGTGCCAAGAAAGAAATTTACACGTAGGAACAGAAGTTACTTCGAAAAATATGCGTTCCGACGAAAATGGCATCAATAATGCATCCAATGATAGTTCTGAGACTGATCAAGATCTGTGGATGGAAGATTCAATAATATGCTCTATGCAGAAGATTGATTACTCGGCTGATGTAATACGTGATTCTTCAAGCACTTGGTTGCATGTGTCATTATCCATTTTGATGGATAATTGA 4197 0.4174 MRSAGHSGVVVNDRNSSGCLIVRKQGDGVGGGFGSSSSSRKLYESKVRKRPSVAESDSESSGELLMPPMRRLGSETIRVCNGLTAFERAIGERSEIGRKRDRTEQIRRNEDSVFDKNGLERRETKRNKLDVFNFDEYDDGFDVQMTQSRKSDGDNGVSFGGRRFMEPMHAASSGIERESETGSGRHIVYSRRNSYYDRASSFYLGDNSNQSRLKGKRGDAQLPLSLLKNKFKSDESIRVQGKNGVLKVMVNKKKEAGLLEHYGHRKPMESRQSLRIDATAKKNPRVHPSSYSETKLVQKPGLVARQEKKRIASKKSFSTKHNKARAWGTEDSDLSLNQELETSKTCKSLKRSGSEEEQTPLREKLPTKIMKEGKVRRGSGTEKQKLREKLREMLLSAGWTIDYRPRRNRDYLDAVYINPGGTAYWSIIKAYDALQKQLNGGDDEANPMGYGSSFAHISDEMLGQLTRKTQKKMERELKKKKIDGSESESESDSERETNRKGSARDKHDKNSTDIDSNEEKLSSFIKQGSKSLKNKMTENAVASASFKSQKSTRRKHDETDKSLSECDTHLSHGRKSRKHGRCTLLVGSSSKGLNSESGGFVPYTGKRTVLSWLIDSGTVSLSQKVQYRRRKRVLLEGWIASDGIHCGCCSKILTISKFEIHAGSKLRQPFRNIYLDSGVSLLQCQIDAWNKQENSEKISYHSVDIDGDDPNDDTCGICGDGGALICCDGCPLTFHQSCLGIQMLPPGEWHCPNCTCKFCGIAIGTVKKGGAAAYDLHTCNFCEKKYHESCAEKMDALSIKSNTSCFCFCGRECKQLFEHLKKYLGTNHELEAGFSWSLIHRTDEDSEAASRGIFQRVECNSKLAVALTIMDECFLPVVDRRSGINLIHNVLYNSGSNFSRLNYNGFYTAILERGDEIISAASIRFHGTRIVEMPFIGTCHIHRHQGMCRRLFSAIESALRSMKVEIMIIPAIAELMQTWTKNFGFTHLEESLRQELRFLNILVFPGINMLQKVLVEKGNFEGNTTASGVEKMENGDEVSIKPKLADGSDDSSNQQDPDGSDNAGSNPVNEINDECTVASQEMKGQVLSDRTVCSKSQSEDMLSDSASDKCSSPSGTNHVAPETENPVKDNLHTPGKSQVISPNDTSIDAHRSDAPDCPENCGLVPETAPSDPNLTEDLVEPISDQKSHLPTAVNGDSSENEMNPDHKAVPSCGLPEEDITIRSDENADESDSILNHADESSLQIVSDKSDSILNHADESSLQISSGLNNNTPEVRKAVPSGGSSEENITTGSYENADMSDFILNHADESSFQISSGLNSETVCQERNLHVGTEVTSKNMRSDENGINNASNDSSETDQDLWMEDSIICSMQKIDYSADVIRDSSSTWLHVSLSILMDN 1398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g1109 1398 MobiDBLite consensus disorder prediction 1338 1356 - -
Lele18g1109 1398 SMART PHD_3 714 755 IPR001965 -
Lele18g1109 1398 MobiDBLite consensus disorder prediction 1025 1215 - -
Lele18g1109 1398 MobiDBLite consensus disorder prediction 1130 1148 - -
Lele18g1109 1398 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 900 990 IPR016181 -
Lele18g1109 1398 Pfam PHD-finger 715 757 IPR019787 -
Lele18g1109 1398 MobiDBLite consensus disorder prediction 1046 1123 - -
Lele18g1109 1398 MobiDBLite consensus disorder prediction 1338 1357 - -
Lele18g1109 1398 CDD PHD2_CHD_II 715 754 - -
Lele18g1109 1398 MobiDBLite consensus disorder prediction 469 520 - -
Lele18g1109 1398 MobiDBLite consensus disorder prediction 540 578 - -
Lele18g1109 1398 ProSitePatterns Zinc finger PHD-type signature. 715 754 IPR019786 -
Lele18g1109 1398 ProSiteProfiles Zinc finger PHD-type profile. 712 757 IPR019787 -
Lele18g1109 1398 MobiDBLite consensus disorder prediction 1262 1291 - -
Lele18g1109 1398 PANTHER PHD FINGER PROTEIN 12 360 1122 IPR042163 GO:0003714|GO:0045892
Lele18g1109 1398 SUPERFAMILY FYVE/PHD zinc finger 704 760 IPR011011 -
Lele18g1109 1398 MobiDBLite consensus disorder prediction 550 572 - -
Lele18g1109 1398 MobiDBLite consensus disorder prediction 42 56 - -
Lele18g1109 1398 Pfam Tify domain binding domain 637 687 IPR032308 -
Lele18g1109 1398 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 703 813 IPR013083 -
Lele18g1109 1398 MobiDBLite consensus disorder prediction 309 330 - -
Lele18g1109 1398 MobiDBLite consensus disorder prediction 23 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g1109 Lele-ChrLele18 7700005 7707607 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g1109 2 1061 PHD Transcription Factor Family AT4G14920 47.579 0.0 877
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Lele18g1109 TDBD 2.4e-20 No_clan