Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g1084 ATGTCTAGTCCATGCTCCCATATTAGAGGAACAAAGGCAGATCCGTTGCTTCAAACCTGGCTGGGTTACGGAGCTGGGGTTAGGGTTAGGGTTGCTGAGAGATGTGGGATGCTTCAGGCATTGATGAATCTGCTCTCTCTCTGTTGGAAGCCATTCGGGCGTGGTGCTGATAATTTCGACACTATTGGAGCTGTTGGGAGCACTTTCCGGGGTGGGGCGGGCTGCAGAGAAGGTAAAGACGGCTTGCTCTGGTTCCGAGACGTAGGAAAGTATGGTTCCGGGGATTTCTCGATGGCCGTGGTTCAGGCGAATCAGGTTCTCGAAGACCAGAGCCAGATCGAGTCTGGTCATCTGGGAACCTTTGTAGGTGTCTACGATGGTCACGGAGGACCCGATGCATCTCGATATGTTTGCGATCACTTGTTTCGTAACTTTCAAGAAATAGCCGCTCAGTCACAGGGAGCTGTGACTGCTGAGACTATTCATAGAGCATTTCTTCAAACAGAAGAGGGGTTCACTTCTCTTGTGTCAGAATTATGGAATACACGACCTCAGATTGCAACTACTGGGACGTGTTGTCTAGCTGGAGTGATATTTCAGCAGACCCTCTATGTGGCAAATGTTGGAGATTCCCGTGTTGTGTTGGGTAAGAAAGTGGGCAACACTGGAGGTATTGCTGCAATTCAGCTATCTACTGAACATAATGCAAATCTTGATGCAATCAGACAGGAACTTAAAGAATTACATCCGCATGATCCCCAAATTGTTGTCCTCAAACATGGAGTGTGGAGAGTTAAAGGCATTATTCAGGTTTCTAGGTCTATAGGAGACGTATATATGAAACATGCGCAGTTCAACCGGGAACCAATTAATCCAAAATTCAGACTTCCAGAGCCAATGCACATGCCTATCTTGTCTGCTAGTCCAACAATTCTTACTCATCCTCTCCAGCCCAGTGATTCCTTCCTTATATTTGCATCAGATGGTTTATGGGAGCACTTGAGTAATGAAAAAGCAGTGGATATTGTCCACAGCAATCCACGTCCGGGTAGTGCCAAGAGACTTATGAAGGCTGCCCTCCAAGAAGCAGCAAGGAAACGAGAAATGAGATATTCGGACCTCCGCAAAATTGACAAGAAGGTTCGCCGCCATTTTCACGATGATATAACTGTTATTGTTTTATTCTTAAACCACGATCTTATATCCAGAGGCACAGTGATAGACCCTCCTCTTTCAATTCGAAGTGCTCTTGATCACTGA 1260 0.4635 MSSPCSHIRGTKADPLLQTWLGYGAGVRVRVAERCGMLQALMNLLSLCWKPFGRGADNFDTIGAVGSTFRGGAGCREGKDGLLWFRDVGKYGSGDFSMAVVQANQVLEDQSQIESGHLGTFVGVYDGHGGPDASRYVCDHLFRNFQEIAAQSQGAVTAETIHRAFLQTEEGFTSLVSELWNTRPQIATTGTCCLAGVIFQQTLYVANVGDSRVVLGKKVGNTGGIAAIQLSTEHNANLDAIRQELKELHPHDPQIVVLKHGVWRVKGIIQVSRSIGDVYMKHAQFNREPINPKFRLPEPMHMPILSASPTILTHPLQPSDSFLIFASDGLWEHLSNEKAVDIVHSNPRPGSAKRLMKAALQEAARKREMRYSDLRKIDKKVRRHFHDDITVIVLFLNHDLISRGTVIDPPLSIRSALDH 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g1084 419 CDD PP2Cc 96 396 IPR001932 -
Lele18g1084 419 SMART PP2C_4 82 394 IPR001932 -
Lele18g1084 419 Pfam Protein phosphatase 2C 119 363 IPR001932 -
Lele18g1084 419 ProSitePatterns PPM-type phosphatase domain signature. 121 129 IPR000222 GO:0043169
Lele18g1084 419 Gene3D - 87 404 IPR036457 -
Lele18g1084 419 ProSiteProfiles PPM-type phosphatase domain profile. 95 396 IPR001932 -
Lele18g1084 419 SUPERFAMILY PP2C-like 105 397 IPR036457 -
Lele18g1084 419 FunFam Probable protein phosphatase 2C 42 86 404 - -
Lele18g1084 419 PANTHER PROTEIN PHOSPHATASE 93 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g1084 Lele-ChrLele18 7424882 7432135 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g1084 37 348 PP2C-type Phosphatase Gene Family AT3G17090 71.474 8.13e-158 446