LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele18g1076	ATGGAGGGGAATCGCAAGAGAGAACCAAACTTAAAGTCGTCGTCTTCTTCTTCTTCTGCCATGGCAACGACATTTTCCGATGAGGTTTTGATCAACCAAGCTTCTTGTTTCTCCACCTTCTTCGATACGTCACCGTTTGGGTCCTACGATCATCGTCATCATCAACATCAACCTGACGAAAAGACTAGTAATTGTAATTCCTTTGGGTTCATGGACTTGCTGGGTGTCCAAGATTACGGTACCCCTTCTTTGTTCGACTGGCTTCCCGCCACCACCACTGCCACGGCGTCATCCATCGTAGCTGATGTATCCCACCACCAGTCCCTCCAGTCGCCGGCGAGCTCAGGCGGGGTGCTGAACACTATTCCGGTGTCTCCGAATTCCTGCTCGCTTTCGTCCTCGTCCAACGACGCGGCCGCTGTCGCCGCCACTGCCAGCAACGTCGGCAGTTTGGAGGAAGAACAGCAGAGTAGTAAAGCAGAGGATGAAGATGTGAACGGAGGAAGAGGCGAAGACGACCAAGAACAAGATAAATCTAAGGAACAGGTGAAACCTAAGAAGACGAAGAAGAAGAAGGAAAAAGAGCCAAGATTTGCGTTCATGACGAAAAGTGAAGTTGATCAGCTCGACGATGGCTATAGATGGCGTAAGTACGGCCAAAAAGCTGTCAAGAACAGCCCTTTTCCCAGGAGTTATTATCGATGCACAACGGTTGGTTGCTGCGTGAAGAAGAGGGTGGAGCGGTCGTCGGACGACCCTACCATCGTGGTGACGACATACGAGGGGCAGCACAAGCACCCGAGTCCGACGGCGGTGACTCGGGCCGGCATGGGGTACGGGTACGGTGGCGGTGGCGGTGGCGGTTTTGGTTCAGCCAACTTGATGGTTCCAGAGAGTTATGAACAACATCATCAGTTTCAGCAGCAGAGCATGATGAATAATTATGTGTCGTCTTCTTCTTCATCGCCATTGCTGTATAACTCAAGCTCATCAATATTGAGCGATATTATTGGATCTAGCAGCAACTACACGAATATGAACTCATCAATGACGATGACGTCATCGTTTTTGAGCTCGTACCTTGGGGAGAACCATAACAGATCTAGAATAATGGATGAAGCTAGTCTGTTAAGAGACAATGGCCTTCTTCAGGACATTATCGTACCATCGCAGATGATGATGAACAAACATGAAAAGCAGTGA	1203	0.4946	MEGNRKREPNLKSSSSSSSAMATTFSDEVLINQASCFSTFFDTSPFGSYDHRHHQHQPDEKTSNCNSFGFMDLLGVQDYGTPSLFDWLPATTTATASSIVADVSHHQSLQSPASSGGVLNTIPVSPNSCSLSSSSNDAAAVAATASNVGSLEEEQQSSKAEDEDVNGGRGEDDQEQDKSKEQVKPKKTKKKKEKEPRFAFMTKSEVDQLDDGYRWRKYGQKAVKNSPFPRSYYRCTTVGCCVKKRVERSSDDPTIVVTTYEGQHKHPSPTAVTRAGMGYGYGGGGGGGFGSANLMVPESYEQHHQFQQQSMMNNYVSSSSSSPLLYNSSSSILSDIIGSSSNYTNMNSSMTMTSSFLSSYLGENHNRSRIMDEASLLRDNGLLQDIIVPSQMMMNKHEKQ	400

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele18g1076	400	FunFam	WRKY transcription factor 57	195	269	-	-
	Lele18g1076	400	PANTHER	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	53	310	IPR044810	GO:0003700
	Lele18g1076	400	Gene3D	WRKY domain	194	270	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Lele18g1076	400	SMART	WRKY_cls	209	268	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele18g1076	400	MobiDBLite	consensus disorder prediction	160	183	-	-
	Lele18g1076	400	Pfam	WRKY DNA -binding domain	210	267	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Lele18g1076	400	MobiDBLite	consensus disorder prediction	144	196	-	-
	Lele18g1076	400	SUPERFAMILY	WRKY DNA-binding domain	201	269	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Lele18g1076	400	ProSiteProfiles	WRKY domain profile.	204	269	IPR003657	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele18g1076	Lele-ChrLele18	7320007	7321978	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele18g1076	179	393	WRKY Transcription Factor Family	AT2G47260	43.056	2.51e-47	163

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Lele18g1076		WRKY	4.1e-26	CL0274