Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g1045 ATGTCGGACATGCGGGTGGTGAAGGAGAAGGAGGACGAGGAGGTGGGACCCCTGGCTGGGGAGGAAGAGGAAGGAGAGGTGGGTTCGAGCTTGACGATGGAGAGGGTGGCTGTCGCCAAGAAGTTCATCGAGAACCATTACAGAGCTCAGATGAAGCTCATACAGGATCGCAAAGAGAGGCGTTCAGTGCTGGAAAAGAAGTTAGCATCTTCTCATGTACCAGAAGAAGAACAGATATATCAACTGAAGGATTTAGAGCGCAAGGAGACTGAGTATATACGTTTAAAACGACACAAAATATGTGTCAGTGATTTTGACCTTCTAGATATTATTGGGAGGGGAGCCTTTGGAGAGGTAAGACTTTGTCGCGAGAAGAAATCAGGCAATATTTATGCCATGAAAAAGTTGAAAAAGTCTGAAATGCTCAGCAGGGGGCAGGTTGAACATGTTAAAGCTGAGCGGAACTTATTAGCAGAAGTTGCGAGTCATTGCATCGTGAAACTATATTACTCCTTTCAGGATGCTGACTACTTATATCTGATAATGGAATATTTACCGGGTGGTGATTTAATGACTTTGCTGATTAGAGAAGAAACTTTGACTGAAAGTGTGGCTAGATTTTACATCGCTCAAAGCGTTTTGGCCATAGAATCTATTCATAAACACAATTACATTCATCGTGATATAAAACCTGACAACCTTCTGTTGGACAGAAATGGTCATATGAAACTCTCTGACTTTGGTCTTTGCAAGCCACTTGATTGCACAAATTTATCATCAATAAATGAAGGTGAAGTCTTAGATGATGAGAACTTGAGTGATACCATGGATATCGATGGATCTTTACCAAATTCTAAAAAATGTGGAAGGCGTTGGAAAAGTCCCCTTGAACAACTTCAGCATTGGCAAATAAACAGGAGGAAGTTGGCATTTTCCACAGTTGGAACTCCAGACTATATTGCTCCTGAAGTGTTGCTTAAAAAGGGATATGGTGTGGAGTGTGACTGGTGGTCTCTTGGTGCTATCATGTATGAGATGCTCGTTGGTTATCCCCCGTTTTACTCCGATGACCCCGTAACAACATGTAGAAAGATTGTACATTGGAAACATCATTTAAAATTTCCAGAGGAGGCAAGGTTGACACCTGAGGCAATGAATCTAATTTGTAGGTTGCTTTGTGAAGATGACCAAAGACTTGGTACTAGAGGGGCAGATGAAATTAAAGCACATCCTTGGTTCAGAGATGTTGTATGGGATAAGCTGTATGAAATGGACGCAGCATTCAAACCACAAGTCTTTGGAGAGCTTGACACACAGAATTTTATGAAATTTGATGAGGTTGAACAACCAAAACCAGCTAGAATTGGATCCGGTCCCATCAGAAAGATGCTATTGACTCCTCAAGATCTTAGCTTTGTTGGTTATACATATAAGAATTTCGATGCTGTCAAGGGTATGCATCATATGGATAAGGGGATGAGGAGCAAATCATCACCTATTCCACCAGTAACTGAATCTCCACAGAGTGATTCTGTAATAGACTATGCTTCTGGATTTGGCAGCCGGTAG 1569 0.4181 MSDMRVVKEKEDEEVGPLAGEEEEGEVGSSLTMERVAVAKKFIENHYRAQMKLIQDRKERRSVLEKKLASSHVPEEEQIYQLKDLERKETEYIRLKRHKICVSDFDLLDIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMLSRGQVEHVKAERNLLAEVASHCIVKLYYSFQDADYLYLIMEYLPGGDLMTLLIREETLTESVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCTNLSSINEGEVLDDENLSDTMDIDGSLPNSKKCGRRWKSPLEQLQHWQINRRKLAFSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWKHHLKFPEEARLTPEAMNLICRLLCEDDQRLGTRGADEIKAHPWFRDVVWDKLYEMDAAFKPQVFGELDTQNFMKFDEVEQPKPARIGSGPIRKMLLTPQDLSFVGYTYKNFDAVKGMHHMDKGMRSKSSPIPPVTESPQSDSVIDYASGFGSR 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g1045 522 MobiDBLite consensus disorder prediction 1 30 - -
Lele18g1045 522 MobiDBLite consensus disorder prediction 1 15 - -
Lele18g1045 522 SMART pkinase_C_6 414 479 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lele18g1045 522 MobiDBLite consensus disorder prediction 490 522 - -
Lele18g1045 522 SUPERFAMILY Protein kinase-like (PK-like) 88 459 IPR011009 -
Lele18g1045 522 Gene3D Transferase(Phosphotransferase) domain 1 312 431 - -
Lele18g1045 522 FunFam Non-specific serine/threonine protein kinase 312 431 - -
Lele18g1045 522 Gene3D Phosphorylase Kinase; domain 1 432 442 - -
Lele18g1045 522 ProSiteProfiles AGC-kinase C-terminal domain profile. 414 487 IPR000961 GO:0004674|GO:0005524|GO:0006468
Lele18g1045 522 Gene3D Transferase(Phosphotransferase) domain 1 189 256 - -
Lele18g1045 522 Pfam Protein kinase domain 107 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g1045 522 Pfam Protein kinase domain 306 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g1045 522 SMART serkin_6 105 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g1045 522 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Lele18g1045 522 ProSiteProfiles Protein kinase domain profile. 105 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g1045 522 FunFam Non-specific serine/threonine protein kinase 66 188 - -
Lele18g1045 522 PANTHER SERINE/THREONINE-PROTEIN KINASE 29 448 - -
Lele18g1045 522 CDD STKc_NDR_like 103 478 - -
Lele18g1045 522 Gene3D Phosphorylase Kinase; domain 1 64 188 - -
Lele18g1045 522 MobiDBLite consensus disorder prediction 499 516 - -
Lele18g1045 522 ProSitePatterns Protein kinases ATP-binding region signature. 111 134 IPR017441 GO:0005524
Lele18g1045 522 FunFam Non-specific serine/threonine protein kinase 189 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g1045 Lele-ChrLele18 7044224 7051306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g1045 22 502 AGC Kinase Gene Family AT2G19400 75.776 0.0 757
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Lele18g1045 Pkinase 4.5e-43 CL0016