Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g1041 ATGAGATCAGTTGCCGTTGCTGTCAACGGCGGCTCCAGCGCTGGCAGAGGTAGCCGGCGTGCCATCCAGTGGGCGGTGGAGAGTCTTATGCCTCAAGCCGATAGGTTCATCTTAGTTCACGTTATGCCCAGAATCGCTTCAATTCCAACCCCATCCGGAGAGTTTATCCCTATTATGGATCTAGAGGCCAACGTGGCGGCAGCTTACATTCAGGATGTAAAGGAGAAGTTCGAGCGAATCTTCGTTCCATTCAAGAAACTCTGCAAAGCAAGCACTGTTGAAACTTTGTTGCTGGAAGATGACAATCCTGCAACTGCACTACTTAGATATATATCAGAATCAGAGATTCAAATATTAGTGTTGGGAACTGACTCTTCAAACTTTATAACAAGGAAGCTAAAAGGACCAGGGATACCAACAGATGTTCTAAGATGTGCTCCTGACACTTGTGACGTATATCTTGTAGCTAGAGATAGAATTATATCAAAATTAGCTGATTCTTCATCTTCACCCTCACATTCTGACTATCTCACTTTTCATCTGACAGAGACTAGCTCTAAGTACTCCGATGTCGATGCTCACTTTGGTAGAGAAATAACTGGACTTAATTCTTCCACAACAGGACCTGAATTTCTCCCAAACATATTCCCATCAATGTCAGAGTGGAGTTATATAGGTTCTCAAACATCTAGTCCTGCAAATTCTCTTAAAGATCCCACTATAAATGAAGGCGATCTAGAAAGCTTTAGAGATGACCCTGAAACTGCAAGCATCTGCCCATTCGATTCCACAGCTTCTGCCCAAATTGAACAACCAGTCATGCAAGAAGTAGAGCAGCTGCAGCTGGAGTTACGTAATACTCTTGCCATGTATAAACAGGTTTGCGAAGAGTTGGCCTTTTCTCAAAGTAAGGTTCATTTACTTTCAGCTGAATATATTGAAGAATCAAGAAGGGTAAATGATTCCCTTAAAAGAGAGGAGACTTTGAGAAAGATTGCTGCTGAAGAAAAAGAAAAGTATTTGAAAGTCATGAAGGAACTCGAGGAGGCAAAAATTAAGTTTGCGAAAGAGTCATTTGAAAGGCAAATAGCTGAACTTAATGTCCTCAAAGAATCTGTAGAAAGGAAGAGAATAATTGATACAATGCTCTCAAGTGACAAGAGGTACAGAAAGTACACTATGGACGAGATTATAGAAGCAACAAACGACTCCTCTAAGGATCTTTTAATTGGCGAAGGAGGTTATGGGAAGGTTTATAAGTGCAGCCTTGATCACACTACAGTAGCTGTAAAGGTTCTTCACCAGGATGCAATGAACAAGAAAGAGGAGTTTCTGAAGGAGGTTGAGATTCTGAGTCAGCTACAACATCCACACATGGTTTTGCTACTAGGAGCCTGTCCTGAAACTGGCTGCCTTGTTTATGAATACCTGGAAAATGGAAGCCTTGATGACTATCTTTTCAATAATAACAGTGGGAAACCGCCACTTCCTTGGTTCATTCGATTCCGTATAGTTTTTGAAGTGGCTTGTGGGTTATCATTCTTACATAATTCAAAGCCTGAGCCAATCGTTCATCGAGATATGAAACCGGGAAATATCTTGTTGGACAGAAATTATGTGAGCAAAATTTCAGATGTTGGATTGGCTAAACTCATTTCAGACGTCATACCTGACAATATCACTGAGTACAGAGAATCTGTGCTTGCTGGTACTTTGCATTACATGGATCCAGAGTATCAGAGAACCGGCACTGTCCGACCAAAATCAGATGTATATGCATTGGGAGTTATAACTCTTCAACTGATAACTGCTCGCCATGCACGCGGACTTATTTTAGCTGTTGAAAATGCCCTTCAAAATGGTTCCTTCTCTCATATTTTAGATAAATCGGCCGGAGATTGGCCACTGACTGAGACAGAAGAGTTGGCTCAAATTGCCCTAAGATGCTCAGCACTGAGATGCAGAGATAGACCAGATCTTGATACTGAAGTTCTTCCATTGCTCAAAAGAATCTGTGATGTGGCAAATGCTACTGCAAAAGTGGGAAGAAATAGTAGCATAGGCCCACCAAGCCAATATTATTGTCCAATCCTTCAGGAAATAATGGATGATCCACATATCGCGGCGGATGGTTTTACCTACGAGTACAGAGCAATCAAGGCATGGCTCAGTAAACACAATGTATCCCCTGTAACTAACCTTACAATGCAGCATTCTACATTGATTACAAACCATACCTTACGTTCCGCCATTAAGGAGTGGAGATCAGGACAAAAGTGA 2280 0.4171 MRSVAVAVNGGSSAGRGSRRAIQWAVESLMPQADRFILVHVMPRIASIPTPSGEFIPIMDLEANVAAAYIQDVKEKFERIFVPFKKLCKASTVETLLLEDDNPATALLRYISESEIQILVLGTDSSNFITRKLKGPGIPTDVLRCAPDTCDVYLVARDRIISKLADSSSSPSHSDYLTFHLTETSSKYSDVDAHFGREITGLNSSTTGPEFLPNIFPSMSEWSYIGSQTSSPANSLKDPTINEGDLESFRDDPETASICPFDSTASAQIEQPVMQEVEQLQLELRNTLAMYKQVCEELAFSQSKVHLLSAEYIEESRRVNDSLKREETLRKIAAEEKEKYLKVMKELEEAKIKFAKESFERQIAELNVLKESVERKRIIDTMLSSDKRYRKYTMDEIIEATNDSSKDLLIGEGGYGKVYKCSLDHTTVAVKVLHQDAMNKKEEFLKEVEILSQLQHPHMVLLLGACPETGCLVYEYLENGSLDDYLFNNNSGKPPLPWFIRFRIVFEVACGLSFLHNSKPEPIVHRDMKPGNILLDRNYVSKISDVGLAKLISDVIPDNITEYRESVLAGTLHYMDPEYQRTGTVRPKSDVYALGVITLQLITARHARGLILAVENALQNGSFSHILDKSAGDWPLTETEELAQIALRCSALRCRDRPDLDTEVLPLLKRICDVANATAKVGRNSSIGPPSQYYCPILQEIMDDPHIAADGFTYEYRAIKAWLSKHNVSPVTNLTMQHSTLITNHTLRSAIKEWRSGQK 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g1041 759 ProSitePatterns Serine/Threonine protein kinases active-site signature. 523 535 IPR008271 GO:0004672|GO:0006468
Lele18g1041 759 SUPERFAMILY Protein kinase-like (PK-like) 386 661 IPR011009 -
Lele18g1041 759 SMART Ubox_2 692 754 IPR003613 GO:0004842|GO:0016567
Lele18g1041 759 Coils Coil 277 297 - -
Lele18g1041 759 SUPERFAMILY RING/U-box 688 756 - -
Lele18g1041 759 Gene3D Transferase(Phosphotransferase) domain 1 477 685 - -
Lele18g1041 759 Coils Coil 330 376 - -
Lele18g1041 759 Pfam Protein tyrosine and serine/threonine kinase 410 661 IPR001245 GO:0004672|GO:0006468
Lele18g1041 759 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 1 156 - -
Lele18g1041 759 CDD RING-Ubox_WDSUB1_like 693 733 - -
Lele18g1041 759 ProSiteProfiles U-box domain profile. 688 759 IPR003613 GO:0004842|GO:0016567
Lele18g1041 759 CDD STK_N 3 157 - -
Lele18g1041 759 PANTHER OS02G0152300 PROTEIN 4 753 - -
Lele18g1041 759 SMART serkin_6 404 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g1041 759 ProSitePatterns Protein kinases ATP-binding region signature. 410 431 IPR017441 GO:0005524
Lele18g1041 759 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 376 476 - -
Lele18g1041 759 Pfam U-box domain 690 757 IPR003613 GO:0004842|GO:0016567
Lele18g1041 759 ProSiteProfiles Protein kinase domain profile. 404 668 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g1041 759 Gene3D HUPs 1 160 IPR014729 -
Lele18g1041 759 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 689 759 IPR013083 -
Lele18g1041 759 Gene3D Phosphorylase Kinase; domain 1 382 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g1041 Lele-ChrLele18 7009924 7015063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g1041 3 756 Plant U-box Gene Family AT5G57035 53.512 0.0 832
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lele18g1041 PK_Tyr_Ser-Thr 6.8e-41 CL0016