Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g1038 ATGCTTGAACTTGCGAGTTGCCAAGAACAGAGCAATTCCTGTGCTCCGTCTCGTTGCGGCATTATCACAAACATCTCACATCCATTCCGACTACGAGATGACCCGCCTGGGTGCGGCGATCCGGTCTACGAGCTAGCCTGTGAAAACAATGTCACCCTGCTTCATCTGTATTCAGGAACATACAGAGTGCAGGGAATCAACTACAACAACTACACAATCCGACTCGTAGATGCTGGCATTCAGGACGGCGATTGCTCTTCCCTCCCTCGCTATCTCTTATCCCGATCTAATTTCACCGATACTTATTACAACTACCCTTACTATAATGATTATGATAGCCGTAACCCCTATAGCGCCTCTCTGCCGCAAGAAATTATGTTAAAGCACGTGGTGTACTTGAAGTGCAAAGATGCAGTGAGGGACGACAAAGCGTACCTGGATACAGCTCCCTGCGTGAAATGGGAAGGAGGAGGCCATGTTTATGCTGTGGCCGGAGATTTGACGGCTGACCGGTTAAAATCTCAGTGTCATGTGAAATCGGTGACCCCCATTACCTCAGGTTGGAAATCATTGGGACCTGGTGGAAGAATCAAGTCATACGCTGATATTCACAGAGGGATTTCCTTTGGATTTGAGCTTTCATGGTGGCAACGAGTTTGTGTTGATTTGAGCTGCCCCCAAGATACCAGGTGCAATTACGACCCTGGAACTACAATTCCGCAACCGCAATGCCAGAGTGACTGTGCTGGATCCTTCGGAATATATAGGAATTGCGGGCTGCAAAAGTTGCTCATAGCTGCTCGAGATTATATCATCGGAATTCTAATAGCAGCAAGAGGAACAATAGGGTATATGGCTCCTGAACTATTCTACAAGAATATTGGGGGAGTGTCATATAAGGCTGATGTTTATAGTTTTGGAATGCTTTTGATGGAAATGGCTAGTCGAAGAAGGAATTTGAATCCAAATGCGGAACATTTAAGCCAACTTTACTTTCCCTTGTGGATTTACGACAAATTTGACGAAGGAAAAGATATAGAAATGGAAGATTTGACAGAAGAGGAAAAGAATTTAGCAAAGAAAATGTTTATAGTGGCACTATGGTGCATACAACTAAAGCCTGCAGATCGCCCTTCAATGAATAAAGTAATAGAGATGCTAGAAGCAGATGATGTTTCAACTCTTGAAATGCCCCCAAAACTTTCTTTATATCCTAATGAAGAAGTTTTGGTAGATGAAAGATCCTACTCTAGCCAGGCAACATCCACTATCTCTACATATGCTCATAGTAATTCAGGGGAAGATACAAATAATGGCAAATAG 1323 0.4369 MLELASCQEQSNSCAPSRCGIITNISHPFRLRDDPPGCGDPVYELACENNVTLLHLYSGTYRVQGINYNNYTIRLVDAGIQDGDCSSLPRYLLSRSNFTDTYYNYPYYNDYDSRNPYSASLPQEIMLKHVVYLKCKDAVRDDKAYLDTAPCVKWEGGGHVYAVAGDLTADRLKSQCHVKSVTPITSGWKSLGPGGRIKSYADIHRGISFGFELSWWQRVCVDLSCPQDTRCNYDPGTTIPQPQCQSDCAGSFGIYRNCGLQKLLIAARDYIIGILIAARGTIGYMAPELFYKNIGGVSYKADVYSFGMLLMEMASRRRNLNPNAEHLSQLYFPLWIYDKFDEGKDIEMEDLTEEEKNLAKKMFIVALWCIQLKPADRPSMNKVIEMLEADDVSTLEMPPKLSLYPNEEVLVDERSYSSQATSTISTYAHSNSGEDTNNGK 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g1038 440 Gene3D Transferase(Phosphotransferase) domain 1 251 398 - -
Lele18g1038 440 PANTHER RUST RESISTANCE KINASE LR10-RELATED 259 409 IPR045874 GO:0004672
Lele18g1038 440 Pfam Protein kinase domain 278 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g1038 440 MobiDBLite consensus disorder prediction 415 440 - -
Lele18g1038 440 Pfam Wall-associated receptor kinase galacturonan-binding 14 77 IPR025287 GO:0030247
Lele18g1038 440 SUPERFAMILY Protein kinase-like (PK-like) 259 388 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g1038 Lele-ChrLele18 6984258 6988167 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g1038 252 426 Receptor kinase-like Gene Family AT4G18250 43.407 1.42e-35 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Lele18g1038 Pkinase 3.6e-08 CL0016