Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0998 ATGGAAGATGATGGGACGATATGCAACACAAGGCTGAGTCTAGGGCTTGGATTAGGCGGTTATGTGATGCCATTAAAGAAGCAGAAGTTTGGACAAGAAGCTATTGTTCATAATAATCATCATCAGAAAGAATTGATCAGTTTGAAGACCAGATCAATCGATGATGATGAAGAAGATGAAAAGAGCGATCATAGCAGGAATAGTTTCAGAAAGAAATTGAGACTCACCAAGGACCAGTCCTCCATGCTTGAAGATAGCTTTGAGCTCCATAGCTCTCTCAACCCATTCCAGAAACAAGAACTTGCTCAGCGATTGAATTTGAAGCCCAGACAGATCGAAGTTTGGTTTCAAAACAGAAGAGCAAGGAAAAAGTTCAAGCAAACGGAGGTAGACTGTGAGATACTGAGAAAATGCTGCGCAAACCTAAGAAACGAGAACAGAAGGTTGAAGAAAGAAGTAGAAGAACTACGTGCTCTGAAAGTCGAAGCGTTGTCGTCGTCTTCGTCACCACCACCATTAATATTAGCAGGAAGCAGTAACATTAACAACAGTATTCAACAACTCTCTAGGGCAGACACGCTGGCTCTGTGTTCTTCTTGTGAGAAGCCATTAATCAAAGGCCATTAA 627 0.4179 MEDDGTICNTRLSLGLGLGGYVMPLKKQKFGQEAIVHNNHHQKELISLKTRSIDDDEEDEKSDHSRNSFRKKLRLTKDQSSMLEDSFELHSSLNPFQKQELAQRLNLKPRQIEVWFQNRRARKKFKQTEVDCEILRKCCANLRNENRRLKKEVEELRALKVEALSSSSSPPPLILAGSSNINNSIQQLSRADTLALCSSCEKPLIKGH 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0998 208 Coils Coil 132 166 - -
Lele18g0998 208 Pfam Homeobox associated leucine zipper 126 159 IPR003106 GO:0006355|GO:0043565
Lele18g0998 208 MobiDBLite consensus disorder prediction 47 73 - -
Lele18g0998 208 ProSitePatterns 'Homeobox' domain signature. 101 124 IPR017970 GO:0000981|GO:0006355
Lele18g0998 208 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 49 202 - -
Lele18g0998 208 Gene3D - 75 122 - -
Lele18g0998 208 SMART HOX_1 68 130 IPR001356 GO:0003677
Lele18g0998 208 SUPERFAMILY Homeodomain-like 60 126 IPR009057 -
Lele18g0998 208 SMART halz 126 169 IPR003106 GO:0006355|GO:0043565
Lele18g0998 208 ProSiteProfiles 'Homeobox' domain profile. 66 126 IPR001356 GO:0003677
Lele18g0998 208 Pfam Homeodomain 70 124 IPR001356 GO:0003677
Lele18g0998 208 CDD homeodomain 70 124 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0998 Lele-ChrLele18 6645288 6646469 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0998 53 202 Homeobox Transcription Factor Family AT4G37790 52.667 3.20e-45 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lele18g0998 Homeodomain 6.9e-16 CL0123