Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0990 ATGGTCGGTTCTCCTAATGATTTGCAGCAATTCTTTTGCTTTAATGAAAAATCTATTGTGTGGGCTGCTCGTTCTAGTAGAACTTGTCCTCAATGTAATGGGGACATAACGCCTTCCCAAATAAAAAGTGGGGGAATCGAATTTGTGCAGAAGTATCGGGCATTTCATGCTTCTGAGAAGCCGGCTCCCAAGTCAGACGTCGCAAAGATGGAAGAACTCGAAATTACTGAGAATTTATTGGACAAACAGCCAAAGTGTCCAGTGTGCCAATATGAGTTCGAGGTGGGAGTCATGGCAAAAGCCATGGCTTGTGGTCACCTCTACCATCCAAATTGCGCTATTAATTGGCTCCAAGAACATAAAAACAAATGTGCTCTCTGTACAGCCAGATTACCCCATGACCAAAAAGTTAGTTACAAGAAACCTGGTGGTGATGGTTCTTCCTCTAGTTCTTCATATGCTTGA 465 0.4301 MVGSPNDLQQFFCFNEKSIVWAARSSRTCPQCNGDITPSQIKSGGIEFVQKYRAFHASEKPAPKSDVAKMEELEITENLLDKQPKCPVCQYEFEVGVMAKAMACGHLYHPNCAINWLQEHKNKCALCTARLPHDQKVSYKKPGGDGSSSSSSYA 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0990 154 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 48 134 IPR013083 -
Lele18g0990 154 ProSiteProfiles Zinc finger RING-type profile. 86 128 IPR001841 -
Lele18g0990 154 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 59 131 - -
Lele18g0990 154 Pfam Ring finger domain 85 127 IPR001841 -
Lele18g0990 154 SUPERFAMILY RING/U-box 71 133 - -
Lele18g0990 154 SMART ring_2 86 127 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0990 Lele-ChrLele18 6599503 6599967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0990 47 127 C3H Transcription Factor Family AT1G68180 35.802 7.64e-12 59.3