Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0983 ATGATAAGTGAATACAATTACAGGGATCGGGAACATATTCTTCTTACTCTGTATATGTTCTCGCTTCTTGAACGCGCATCGGGGATTATTTGTTTTCGACAAATGAGTTACTCAAAGGGTTCACCTCGCCTACGAAATGACATAGAGGCGGGGAATTGTCGCTCCGGCGACTTAGATGAAGGGGAGGGTACGTCCGATCCTTTTGATATTTCCAGTACAAAAAATGCTTCCATTGAACGGCTCAAGCGGTGGAGGCAAGCTGCGCTTGTGCTTAACGCTTCTCGTCGGTTCCGTTATACCTTGGACCTGAAAAAAGAAGAAGAGAAGCAGCAAACATTGAGGAAGATCAGGGCGCATGCACAAGCCATTAGGGCTGCATATCTTTTCAAAAAAGCTGCTGTGCCACCTGTGAATGGGACTCCAACACCACCTCCTGCTGCTCCTGGTGACTTTCCAATTGGGCAGGAGCAGCTTGCTTCAATTTCAAGGGATCATAACAGTGATGTCCTGCAGCAATATGGAGGGGTTAGAGGGCTGGCGGAGTCATTGAAAACCAATTTAGAGAAGGGGGTTCATGGTGATGATGGTGACTTAATGAAGCGGAGGAATGCCTATGGGTTAAACAATTATCCTCGGAAGAAGCCCAGGAGTTTTTTGATGTTTGTGTGGGATGCTTGCAAGGATCTGACCCTGGTTATATTAATGGTCGCGGCAGTGGCTTCATTGGCACTAGGAATAAAATCTGAGGGTATAAAAGAAGGATGGTATGATGGAGGGAGCATTGCTTTTGCAGTTATTCTTGTCATTGTGGTTACTGCTATAAGTGATTATAAGCAGTCTCTTCAGTTTCGTGATTTAAATGAGGAGAAGAGAAATATACATCTAGAGGTTATAAGAAATGGTAGAAGAGTTGAGATCTCAATCTATGATATTGTTGTTGGTGATGTTATACCTCTGAATATTGGCGATCAGGTCCCTGCTGATGGAATTTTGATAACTGGTCACTCTCTTGCAATTGATGAATCAAGTATGACTGGCGAGAGCAAGATTGTTCACAAGGACTCAAAGAACCCCTTTTTGATGTCTGGATGTAAAGTTGCAGATGGCAGTGGCACTATGCTGGTTACAGGTGTTGGTATTAATACTGAGTGGGGGCTTTTAATGGCTAGTATATCAGAAGACACTGGTGAAGAAACACCTTTGCAGGTACGCTTAAATGGTGTCGCCACCTTCATTGGTATCGTTGGACTAACTGTGGCTGCTGTTGTTCTGGTTGTGCTACTGGTCAGATATTTTACTGGCCATACTGAAAACTCAGATGGAAGCCCTCTGTTTAAGGCAGGCCATACAAAACTTGGTACTGCGATTAATGGAGCAATTAAGATAGTCACAGTTGCCGTCACCATTGTAGTGGTTGCAGTGCCGGAAGGGCTTCCTTTAGCAGTTACCTTAACACTTGCTTACTCGATGAGAAAAATGATGGTGGATAAAGCTTTGGTGAGGAGGCTTTCGGCCTGTGAGACAATGGGTTCTGCCACAACCATTTGCAGTGATAAGACTGGAACATTGACTAAGAATGAGATGACTGTGACAGAAGCTTACATTGGGGGGAAGAAGACTGATGCTCCTCACAACAAATCTGAGCTCTCTGATATGTACTGCTCTTTGCTTGTTGAAGGTGTTGCACAAAACACCAATGGCAGTGTTTATGTACCTGAGGGTGGTAACAATGTTGAGGTCTCTGGATCACCGACAGAAAAGGCAATTTTGAACTGGGGAATTCAGCTTGGGATGGATTTTGAGGCTGTCAGATCAGAGTCATCAATTATACACGTATTTCCATTCAATTCAGAGAAAAAACGTGGGGGAGTCGCCGTGAGGATGCCTGACTCTCAAGTTCATATACATTGGAAGGGTGCTGCTGAGATTGTACTGGCCTGTTGTACAGCATATTTGGATGCAAAGAACCAGTTTGCAGAGATGGATGAAGAGAAGATGACATATTTTAAAAAAGCTATTGAAGATATGGCTGCTGAGAGTCTTCGCTGTGTTGCCATTGCATATAGATCTTATGAAATAGAGAAAGTTCCAACTAGCGAAGAAGAACTTGCTCGCTGGTCATTACCTGAGGATGATCTTGTTTTATTGGCTATTGTTGGTCTGAAGGATCCTTGTCGACCTGGTGTCAAGGATGCAGTGCAACTTTGCCAAAAAGCTGGAGTGAAGGTGCGAATGGTCACCGGGGACAATGTGCAAACTGCGAAAGCAATTGCTCTGGAATGTGGAATACTTGGTTCATCTGCAGATGCCAGGGAGCCAAACATTATTGAAGGCAAAAGATTTCGGGAGTTATCAGACTCACAGAGAGAGGATATTGCAGAAAGGATATCGGTTATGGGGCGGTCTTCTCCTAATGACAAGCTTTTGCTTGTGCAAGCCTTGAGAAAGAAGGGGCATGTTGTTGCTGTAACTGGGGATGGAACTAATGATGCTCCTGCACTGCATGAGGCTGATATAGGTCTTGCAATGGGCATCCAAGGGACAGAAGTTGCCAAGGAGAGCTCTGATATCATCATTTTAGATGACAATTTTGCATCCGTTGTGAAGGTTGTTAGATGGGGACGATCTGTATATGCGAATATCCAGAAATTTATCCAGTTTCAGCTTACAGTAAATGTGGCAGCTCTTGTAATTAACGTTGTTGCTGCAGTTTCTTCTGGCGATGTCCCGCTGAATACAGTGCAGCTTCTCTGGGTAAATCTGATTATGGATACACTTGGAGCACTAGCCTTGGCAACAGAACCACCAACTGATCACCTAATGGATCGATCTCCTGTGGGTCGAAGGGAACCTCTCATAACGAATATCATGTGGAGGAATTTGCTCATACAGGCAATATACCAAATATCTGTTTTGCTAGTACTCAACTTCCAAGGCAGGAGCTTACTGGGTCTAAAGCATGAAGAGTTCACCCATTCTCTCAGAGTGAAGAACACTTTAATATTTAATGCATTTGTTTTCTGTCAGATCTTTAACGAATTCAATGCTCGAAAGCCAGATGAATACAACATCTTCAAGGGGGTCACAAAAAACTACCTCTTCGTGGGGATAGTGGGAATAACTCTTGTGCTTCAGATCATCATTGTTGAATTTCTGGGAAAATTTACCAAGACAGTCAGGCTAAATTGGAAGATGTGGATCATTTCCGTTGTCATTGGATTCATCAGCTGGCCTCTTGCTGCGGCTGGGAAGTTGATATCTTTACCTGAAACTCCCTTTGCCGAGTATTTTACAAGATGTTTCCGGCGGCGATGA 3315 0.4389 MISEYNYRDREHILLTLYMFSLLERASGIICFRQMSYSKGSPRLRNDIEAGNCRSGDLDEGEGTSDPFDISSTKNASIERLKRWRQAALVLNASRRFRYTLDLKKEEEKQQTLRKIRAHAQAIRAAYLFKKAAVPPVNGTPTPPPAAPGDFPIGQEQLASISRDHNSDVLQQYGGVRGLAESLKTNLEKGVHGDDGDLMKRRNAYGLNNYPRKKPRSFLMFVWDACKDLTLVILMVAAVASLALGIKSEGIKEGWYDGGSIAFAVILVIVVTAISDYKQSLQFRDLNEEKRNIHLEVIRNGRRVEISIYDIVVGDVIPLNIGDQVPADGILITGHSLAIDESSMTGESKIVHKDSKNPFLMSGCKVADGSGTMLVTGVGINTEWGLLMASISEDTGEETPLQVRLNGVATFIGIVGLTVAAVVLVVLLVRYFTGHTENSDGSPLFKAGHTKLGTAINGAIKIVTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMVDKALVRRLSACETMGSATTICSDKTGTLTKNEMTVTEAYIGGKKTDAPHNKSELSDMYCSLLVEGVAQNTNGSVYVPEGGNNVEVSGSPTEKAILNWGIQLGMDFEAVRSESSIIHVFPFNSEKKRGGVAVRMPDSQVHIHWKGAAEIVLACCTAYLDAKNQFAEMDEEKMTYFKKAIEDMAAESLRCVAIAYRSYEIEKVPTSEEELARWSLPEDDLVLLAIVGLKDPCRPGVKDAVQLCQKAGVKVRMVTGDNVQTAKAIALECGILGSSADAREPNIIEGKRFRELSDSQREDIAERISVMGRSSPNDKLLLVQALRKKGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALVINVVAAVSSGDVPLNTVQLLWVNLIMDTLGALALATEPPTDHLMDRSPVGRREPLITNIMWRNLLIQAIYQISVLLVLNFQGRSLLGLKHEEFTHSLRVKNTLIFNAFVFCQIFNEFNARKPDEYNIFKGVTKNYLFVGIVGITLVLQIIIVEFLGKFTKTVRLNWKMWIISVVIGFISWPLAAAGKLISLPETPFAEYFTRCFRRR 1104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0983 1104 Gene3D - 199 392 - -
Lele18g0983 1104 Gene3D - 76 131 - -
Lele18g0983 1104 Gene3D - 224 1080 - -
Lele18g0983 1104 MobiDBLite consensus disorder prediction 46 71 - -
Lele18g0983 1104 Pfam haloacid dehalogenase-like hydrolase 513 838 - -
Lele18g0983 1104 PRINTS Sodium/potassium-transporting ATPase signature 259 279 - -
Lele18g0983 1104 PRINTS Sodium/potassium-transporting ATPase signature 635 653 - -
Lele18g0983 1104 PRINTS Sodium/potassium-transporting ATPase signature 509 530 - -
Lele18g0983 1104 PRINTS Sodium/potassium-transporting ATPase signature 896 917 - -
Lele18g0983 1104 FunFam Calcium-transporting ATPase 9 plasma membrane-type 370 540 - -
Lele18g0983 1104 PRINTS P-type cation-transporting ATPase superfamily signature 717 728 - -
Lele18g0983 1104 PRINTS P-type cation-transporting ATPase superfamily signature 739 749 - -
Lele18g0983 1104 PRINTS P-type cation-transporting ATPase superfamily signature 824 843 - -
Lele18g0983 1104 PRINTS P-type cation-transporting ATPase superfamily signature 516 530 - -
Lele18g0983 1104 PRINTS P-type cation-transporting ATPase superfamily signature 340 354 - -
Lele18g0983 1104 PRINTS P-type cation-transporting ATPase superfamily signature 848 860 - -
Lele18g0983 1104 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 456 549 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele18g0983 1104 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 791 904 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele18g0983 1104 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 261 430 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele18g0983 1104 Pfam E1-E2 ATPase 294 494 - -
Lele18g0983 1104 Pfam Ca2+-ATPase N terminal autoinhibitory domain 66 108 IPR024750 GO:0005516
Lele18g0983 1104 SMART Cation_ATPase_N_a_2 172 246 IPR004014 -
Lele18g0983 1104 Pfam Cation transporter/ATPase, N-terminus 174 241 IPR004014 -
Lele18g0983 1104 PANTHER CATION TRANSPORTING ATPASE 117 1087 - -
Lele18g0983 1104 FunFam Calcium-transporting ATPase 271 392 - -
Lele18g0983 1104 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 166 1086 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Lele18g0983 1104 FunFam Calcium-transporting ATPase 841 1090 - -
Lele18g0983 1104 CDD P-type_ATPase_Ca_PMCA-like 200 957 - -
Lele18g0983 1104 FunFam Calcium-transporting ATPase 526 724 - -
Lele18g0983 1104 FunFam Calcium-transporting ATPase 718 869 - -
Lele18g0983 1104 SFLD p-type atpase 498 876 IPR044492 -
Lele18g0983 1104 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 523 721 IPR023299 GO:0000166
Lele18g0983 1104 SUPERFAMILY Calcium ATPase, transduction domain A 294 389 IPR008250 -
Lele18g0983 1104 FunFam Calcium-transporting ATPase 224 281 - -
Lele18g0983 1104 SUPERFAMILY HAD-like 514 929 IPR036412 -
Lele18g0983 1104 SUPERFAMILY Calcium ATPase, transmembrane domain M 173 1086 IPR023298 -
Lele18g0983 1104 Gene3D - 526 724 IPR023299 GO:0000166
Lele18g0983 1104 Gene3D - 513 869 IPR023214 -
Lele18g0983 1104 Pfam Cation transporting ATPase, C-terminus 909 1086 IPR006068 -
Lele18g0983 1104 FunFam Calcium-transporting ATPase 76 132 - -
Lele18g0983 1104 SFLD Haloacid Dehalogenase 498 876 - -
Lele18g0983 1104 ProSitePatterns E1-E2 ATPases phosphorylation site. 518 524 IPR018303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0983 Lele-ChrLele18 6528514 6543184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0983 41 1097 Primary Pumps ATPases AT4G29900 74.057 0.0 1597