Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0981 ATGGGTACTGTGACTACGAAAGGCAATAATGCCACCTTTCATTGTGATTTCGATTATGGTTATGATGTTTATTTAACTTCTTTTCTGAAACTTTGCCGTTGCGGGAACGCAAACCACTTCCTTCTACCGCCAACTCCGCAACTTTTAAGCGGTGAAACCACAAGTACGTAGATGGGCGGAGAGGATGTTAAAGCAGTTGTTCCTGAGTCTGTATTGAAAAAGCAGAAGAGAAGCGAGGAATGGGCTCTGGCAAAAAAGCAGGATCTTGAAGCTGCCAAGAAAAAGAGATCTGAAACAAGGAAACTAATTTTTAATAGGGCGAAACAGTATGCAAAGGAATATGACGAGCAGCAAAAGGAGTTGATTAGATTGAAGCGTGAAGCAAAGCTTAAGGGTGGATTTTATGTTGACCCAGAAGCCAAGCTGTTGTTCATCATCAGGATCCGTGGTATCAATGCTATGGATCCAAAAAGTAGGAAGATTTTGCAGCTTCTGCGTTTGCGACAGATATTTAATGGTGTCTTTCTCAAAGTTAACAAAGCCACTATGAATATGCTGCACAGGGTTGAGCCTTATGTTACTTATGGGTACCCTAATTTAAAAAGCATCAAGGAACTGATCTACAAGAGAGGTTTTGGGAAAGTTAAGAAGCAGAGAATTCCTTTGACTGACAACTCCATTATTGAACAGAGTTTGGGTCAGCATGGGATTATTTGCACTGAAGATTTGATCCACGAGATCATGACCGTTGGACCTCACTTCAGAGAAGCAAATAACTTCCTGTGGCCTTTCAAGCTCAAGGCTCCACTAGGTGGTTTGAAGAAGAAAAGAAATCATTATGTGGAAGGAGGTGATGCTGGCAACCGTGAAGATTATATTAATGAGCTTATTAGAAGGATGAACTAG 906 0.4117 MGTVTTKGNNATFHCDFDYGYDVYLTSFLKLCRCGNANHFLLPPTPQLLSGETTSTXMGGEDVKAVVPESVLKKQKRSEEWALAKKQDLEAAKKKRSETRKLIFNRAKQYAKEYDEQQKELIRLKREAKLKGGFYVDPEAKLLFIIRIRGINAMDPKSRKILQLLRLRQIFNGVFLKVNKATMNMLHRVEPYVTYGYPNLKSIKELIYKRGFGKVKKQRIPLTDNSIIEQSLGQHGIICTEDLIHEIMTVGPHFREANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNREDYINELIRRMN 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0981 301 Coils Coil 107 131 - -
Lele18g0981 301 FunFam 60S ribosomal protein L7 142 246 - -
Lele18g0981 301 SUPERFAMILY Ribosomal protein L30p/L7e 142 301 IPR036919 -
Lele18g0981 301 Gene3D - 246 301 IPR036919 -
Lele18g0981 301 Gene3D - 142 245 IPR036919 -
Lele18g0981 301 CDD Ribosomal_L7_archeal_euk 142 301 IPR035808 -
Lele18g0981 301 TIGRFAM uL30_euk: 60S ribosomal protein uL30 68 301 IPR005998 GO:0000463|GO:0003735|GO:0022625
Lele18g0981 301 PANTHER 60S RIBOSOMAL PROTEIN L7 65 301 IPR039699 -
Lele18g0981 301 ProSitePatterns Ribosomal protein L30 signature. 161 193 IPR018038 -
Lele18g0981 301 Pfam Ribosomal L30 N-terminal domain 67 138 IPR012988 -
Lele18g0981 301 Pfam Ribosomal protein L30p/L7e 143 193 IPR016082 -
Lele18g0981 301 FunFam 60S ribosomal protein L7 247 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0981 Lele-ChrLele18 6503753 6509008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0981 58 301 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 83.197 8.57e-154 428