Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0961 ATGGCTGCCGACGAGGGAAAGGAGAAGGTAGTGAAGAAGTTGCAGAAGAGCTACTTCGACGTGCTAGGATTATGCTGCTCGTCGGAGGTGCCTGTCATCGAGAACATCCTGAAAGCTCTGGAGGGGATCAAGGAGGTTTCCGTCATCGTGCCGTCCAGAACGGTCATTGTTGTCCACGATAGTTTTGTAATCTCACAAGCTCAAATCGTTAAGGCTCTGAATCAATCGAGATTTGAAGCAAATATGAGATCAGTAAATGGGACAGAGCTGAAGAGGAGAATGCCAAGCCCATATGCAATAGCTTGTGGAGTACTCCTTTTGCTTTCATTTTTAAAGTACGTGTACCGTCCTTTGGAATATCTGGCCCTCGGAGCTGTAGCTGCTGGTGCTTTCTCTATTCTTTTGAAAGCCGTGGCCTCCATTCGCAACCTTAGGATTGACATCAATACTCTCATGCTCATTGCAGTTGTTGGGACAATTGCTATGAGCGATTATTTGGAAGCTGGCACCATAGTTTTTTTATCTTCAATTGCAGAATGGTTAGAGTCAAGGGCAAGCCACAGGGCGAGCGCAGCGATGTCATCGCTGTCGAACATAGCCCCTCAGGAAGCAGTGATAGCAGAAACGGGAGAAGCGGTCGACGCCGATGAGGTGAAAGTGAACACCATCGTAGCCGTTAAAGCTGGCGAAGTGATACCCATTGATGGGATTGTTGTTGAAGGCAGCTGCGAAGTCGATGAGAAGACATTGACTGGGGAATCATACCCTGTACTCAAACAGCAGGATTCTCCTGTGTGGGCTGGTACAATCAACCTAAATGGTTACATTGAAGTGAAGACTACTGCACTTTCCGAGGACTGTGTGGTGGCCAAAATGGCGAAGCTTGTGGAAGAAGCTCAAAACAGCAAAACCAGCACACAGAGATTGATCGATAAATTTGCCAAATTTTACACCCCAGCTGTTGTGGCCATATCAACTCTTTTAGCGGTGATTCCACTTGTGTTAAGAGTAAATAATGAGAGACATTGGTGTCACTTTGCCTTGGTTGTTTTAGTAAGTGCATGTCCTTGTGCACTTATCCTTTCTACGCCAGTTGCAACTTTCTGTGCTTATACCAAAGCAGCTAAATCTGGTCTTCTCATCAAAGGGGGTGATTATCTTGAAACCCTTGCAAAAATTAAGGTTATGGCTTTTGACAAAACGGGTACTATCACAAAGGGGGAATTTTCGGTGTCAAATTTCCAGTCTCTTTCTGATGACATCGATATGAACACATTACTACTATGGGTCACCAGCATCGAAAGCAAGTCAAGCCATCCGATTGCAGCAGCAATTGTGGACTATGGAAGGTCACTTTCCATTGAACCAAAACCCGAAAGGGCGACAGAATTTGAAAGTTTTCCTGGAGAGGGCATTCATGGAAAAATTGATGGGAGAGATATTTACATTGGAAATGGAAAAATTGTCACTAGAGCTGGGTCTGAAACGGTTCCTGCCTCACAGGGTGACAATCTGGTTGGAAAAACAACTGGCTACGTCTACTCTGGAGCAACGCCAATTGGATTTTTCTCTCTGACGGATGCTTGCCGATCTGGCGCGAAGGAGGCAATAGGGCAGCTGAAATCCTTGAGCATCAAAACCTCAATGCTCACAGGAGATTGTCAAGCAGCTGCCATGCAAGCACATGATCAGCTAGGGCATGTTCTGGAGCTAGTCCATGCAGAACTTTTACCTGAAGACAAAGCAAAAATCATCGAAGAATTCAAGAAGGAAGGACCAACAGCGATGGTTGGAGATGGCATAAACGATGCACCTGCACTTGCTGTAGCTGATATTGGCATCTCAATGGGGATTTCAGGTTCTGCACTAGCAAGTGAGACAGGCAATATAATTCTTATGTCAAATGATCTAAGGAAGATACCTCAAGCCATCAAGCTTGCAAGAAAATCTCACAGGAAAGTAATAGAAAATATCATCTTGTCAGTAATTACTAAAGCCGCGATTCTCGGCTTGGCCATTTGTGGTCATCCACTTGTTTGGGCTGCAGTTCTTGCTGATGTAGGAACATGCCTGTTGGTGATCTTAAACAGCATGCTACTTTTGAATGGGTCATCCAATCATAAAGGAAAATGTTGTAGACCTTCTTCTGGACCACACATCCATAATCATGGATGCAAGGCACCTCATGACAAGTTCTCTCATCACCATCACCACCACCATCATCATCATGAACATAAACATGAGCATCAGAACGATCACCGTTGTTGCTCAGACAAGAAGAACGTGATGTCTCAGCCTCATAAATGCGCCTCCCTAATTACTGTCTCAAAGTGCCATTCTGGCCCTGCAATTTCAGGCTCGTGTGGACATGCTATGCATGGGAATATCATGGAGAGTCATGCTCAAGGTAATGTCAATGCTGAGTTCCATGAACCCAAGCATTGCCATCAAGGAAGCTGTGACAAGAACCAAGATGGAGCCCATTTGCATGATGTGAAAAATCCAATTTCTCTGGGTTCTCACATCTTGGATCTGCCTGCAGAAGGTAGGCATTTGACCGCATTAAACAGCAAGTCCCATGAAACAGTACACTGCCATAATGGAAACTGTGACATGGGAACTCACGGTAGATCATCACCGATTTCTCCTTGCCATCTCAATTCTTCTGCTTCAATAGATTGCCACTTGATGTCTGATTGTAAAAATACAAAATGTCATTCTGAACCTGCCAAGAAGCACCAGGAAGACCACGTATGTGTCGACATTGACGAAGATGAGCATGCCAAGTCATACTCAATGCAAACTTGTGTATGTTCAGGAGAGAAAGAATGTGAAACTTCCACTGTTGTGTGCACTTGTGATAGTTCAAATGACAGACAAGTTGATGGTGCATGTTGTGCAGACCAGAGATGTTCAAAGAAATCCACAGATTTCACTGTTGTGCATGCCAGTGGGAGTTTAGACAAGAGAGAGAATGTTCATGTTGCAAGTGCCACATGA 3000 0.4473 MAADEGKEKVVKKLQKSYFDVLGLCCSSEVPVIENILKALEGIKEVSVIVPSRTVIVVHDSFVISQAQIVKALNQSRFEANMRSVNGTELKRRMPSPYAIACGVLLLLSFLKYVYRPLEYLALGAVAAGAFSILLKAVASIRNLRIDINTLMLIAVVGTIAMSDYLEAGTIVFLSSIAEWLESRASHRASAAMSSLSNIAPQEAVIAETGEAVDADEVKVNTIVAVKAGEVIPIDGIVVEGSCEVDEKTLTGESYPVLKQQDSPVWAGTINLNGYIEVKTTALSEDCVVAKMAKLVEEAQNSKTSTQRLIDKFAKFYTPAVVAISTLLAVIPLVLRVNNERHWCHFALVVLVSACPCALILSTPVATFCAYTKAAKSGLLIKGGDYLETLAKIKVMAFDKTGTITKGEFSVSNFQSLSDDIDMNTLLLWVTSIESKSSHPIAAAIVDYGRSLSIEPKPERATEFESFPGEGIHGKIDGRDIYIGNGKIVTRAGSETVPASQGDNLVGKTTGYVYSGATPIGFFSLTDACRSGAKEAIGQLKSLSIKTSMLTGDCQAAAMQAHDQLGHVLELVHAELLPEDKAKIIEEFKKEGPTAMVGDGINDAPALAVADIGISMGISGSALASETGNIILMSNDLRKIPQAIKLARKSHRKVIENIILSVITKAAILGLAICGHPLVWAAVLADVGTCLLVILNSMLLLNGSSNHKGKCCRPSSGPHIHNHGCKAPHDKFSHHHHHHHHHHEHKHEHQNDHRCCSDKKNVMSQPHKCASLITVSKCHSGPAISGSCGHAMHGNIMESHAQGNVNAEFHEPKHCHQGSCDKNQDGAHLHDVKNPISLGSHILDLPAEGRHLTALNSKSHETVHCHNGNCDMGTHGRSSPISPCHLNSSASIDCHLMSDCKNTKCHSEPAKKHQEDHVCVDIDEDEHAKSYSMQTCVCSGEKECETSTVVCTCDSSNDRQVDGACCADQRCSKKSTDFTVVHASGSLDKRENVHVASAT 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0961 999 ProSitePatterns E1-E2 ATPases phosphorylation site. 399 405 IPR018303 -
Lele18g0961 999 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 148 700 IPR027256 GO:0006812|GO:0016020|GO:0019829
Lele18g0961 999 SFLD p-type atpase 380 649 IPR044492 -
Lele18g0961 999 PRINTS Copper-transporting ATPase signature 188 206 - -
Lele18g0961 999 PRINTS Copper-transporting ATPase signature 632 646 - -
Lele18g0961 999 PRINTS Copper-transporting ATPase signature 319 333 - -
Lele18g0961 999 PRINTS Copper-transporting ATPase signature 575 592 - -
Lele18g0961 999 SUPERFAMILY HAD-like 396 698 IPR036412 -
Lele18g0961 999 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 171 673 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Lele18g0961 999 Gene3D - 408 529 IPR023299 GO:0000166
Lele18g0961 999 TIGRFAM ATPase-IB2_Cd: cadmium-translocating P-type ATPase 148 701 - -
Lele18g0961 999 FunFam Putative cadmium/zinc-transporting ATPase 3 11 84 - -
Lele18g0961 999 Gene3D - 388 648 IPR023214 -
Lele18g0961 999 FunFam Putative cadmium/zinc-transporting ATPase 3 408 529 - -
Lele18g0961 999 MobiDBLite consensus disorder prediction 730 748 - -
Lele18g0961 999 Pfam E1-E2 ATPase 208 376 - -
Lele18g0961 999 SUPERFAMILY HMA, heavy metal-associated domain 12 85 IPR036163 GO:0046872
Lele18g0961 999 SUPERFAMILY Calcium ATPase, transmembrane domain M 149 391 IPR023298 -
Lele18g0961 999 Gene3D - 10 83 - -
Lele18g0961 999 Gene3D - 185 300 - -
Lele18g0961 999 CDD HMA 19 80 IPR006121 GO:0046872
Lele18g0961 999 SUPERFAMILY Calcium ATPase, transduction domain A 211 296 IPR008250 -
Lele18g0961 999 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 11 702 - -
Lele18g0961 999 SFLD C1.7: P-type atpase like 380 649 - -
Lele18g0961 999 MobiDBLite consensus disorder prediction 730 751 - -
Lele18g0961 999 ProSiteProfiles Heavy-metal-associated domain profile. 16 82 IPR006121 GO:0046872
Lele18g0961 999 Pfam haloacid dehalogenase-like hydrolase 393 611 - -
Lele18g0961 999 FunFam Copper-transporting ATPase 1, putative 186 300 - -
Lele18g0961 999 CDD P-type_ATPase_HM 99 699 - -
Lele18g0961 999 PRINTS P-type cation-transporting ATPase superfamily signature 621 633 - -
Lele18g0961 999 PRINTS P-type cation-transporting ATPase superfamily signature 543 553 - -
Lele18g0961 999 PRINTS P-type cation-transporting ATPase superfamily signature 246 260 - -
Lele18g0961 999 PRINTS P-type cation-transporting ATPase superfamily signature 597 616 - -
Lele18g0961 999 PRINTS P-type cation-transporting ATPase superfamily signature 397 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0961 Lele-ChrLele18 6278593 6288767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0961 12 789 Primary Pumps ATPases AT4G30110 60.216 0.0 998