Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0946 ATGGAAAGATTCCTCAACAACGGCAAACAAGAGAAACCCATCAGATTCTCACCTGAAGAACTTGAAGAAATCACAAAGAACTACACCACTATTCTGGGTTCTGGTGCTTTTGGGGTGGTTTATGAAGGTGAATTGTCAAATGGACAGCAAGTTGCAGTGAAGGTTCTCAACAGTTTGGATCTGGGCACAGAAGAACAATTCAAGGCAGAAGTTAGCACTACTGGAAGAACTTACCATATCAATTTAGTTATGCTTTATGGGTTCTGCTCCCACCGTGACAAGAGAGCTCTTGTATATGAATTTGTTCAAAATGGGTCTCTCAACAATCTATTATTTGGCAGTTTGAACGGAGAAGTTGAGGAACAAGAGGAAGTAGCCATGTGTGATGTTTATAGTTTTGGGATTGTTCTGTTTGAAATTGTGGGGAGGAGAAGGCATTTTGTTAGTGGTTGCAGTGAATCACAACAATGGCTTCCAAAATGGACAAGGGAAATGTTTGAGAACAATGAATTACCAGTGATGATTTCACTGTGTGGGATTGAAGAGAAAGACAGAGAAAAAGCAGAGAGAATGATAATGGTGGCTCTTTGGTGTGTTCAGTGTTGCCCTTCTGATAGACCTCTTATGAGTAATGTGGTGGAGATGTTAGAGGGTGATATAGAAATTCGGCCACCACCATTTCCACTTCAGAATTTGGTGTCTTCTAAACCACCTTTGACTTCAAAGGGAATCAATGAAGATTCAGATGTTTCTAGTTCATGGGTGACTGAATCTTCTGAACAATCTAATTCTAAACCAGCCAACAATATTTCCATATAG 819 0.4005 MERFLNNGKQEKPIRFSPEELEEITKNYTTILGSGAFGVVYEGELSNGQQVAVKVLNSLDLGTEEQFKAEVSTTGRTYHINLVMLYGFCSHRDKRALVYEFVQNGSLNNLLFGSLNGEVEEQEEVAMCDVYSFGIVLFEIVGRRRHFVSGCSESQQWLPKWTREMFENNELPVMISLCGIEEKDREKAERMIMVALWCVQCCPSDRPLMSNVVEMLEGDIEIRPPPFPLQNLVSSKPPLTSKGINEDSDVSSSWVTESSEQSNSKPANNISI 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0946 272 MobiDBLite consensus disorder prediction 238 272 - -
Lele18g0946 272 Gene3D Phosphorylase Kinase; domain 1 4 98 - -
Lele18g0946 272 Gene3D Transferase(Phosphotransferase) domain 1 99 226 - -
Lele18g0946 272 Pfam Protein tyrosine and serine/threonine kinase 30 124 IPR001245 GO:0004672|GO:0006468
Lele18g0946 272 FunFam serine/threonine-protein kinase PBS1-like 2 101 - -
Lele18g0946 272 ProSiteProfiles Protein kinase domain profile. 26 272 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0946 272 ProSitePatterns Protein kinases ATP-binding region signature. 32 54 IPR017441 GO:0005524
Lele18g0946 272 SUPERFAMILY Protein kinase-like (PK-like) 12 225 IPR011009 -
Lele18g0946 272 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 128 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0946 Lele-ChrLele18 6112301 6113196 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0946 111 228 Receptor kinase-like Gene Family AT5G39030 35.246 4.28e-17 79.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Lele18g0946 PK_Tyr_Ser-Thr 4.6e-15 CL0016