Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0943 ATGAAGTATCTCCGAACCAGTAGCCTCAAGAGGCTCTTCTCCTTGAAACGACGCAGTTTCACTGAGGAAGTTCCCCCCGGCGATGAAAAAGTTGAGAACTTGCAGGTTCTTCCAGCGCCCGAACAGCCTTCTTCTCAAAGACCCACTTGGAAATGCTTCTCCTACGAAGAACTCTTCGATGCCACCAATGGCTTCAGCTCAGAAAATCTGGTCGGAAAAGGAGGCTATGCACAGGTTTACAAGGGGACATTGAAAAATGGGTACGAGATTGCAGTGAAAAGGCTCACAAGAGCTTGTTCAAGCGATGAGAGGAAAGAGAAGGAGTTCTTGACAGAGATTGGCACAATAGGTCATGTTAATCATCCAAATGTTCTGCCTCTTCTCGGTTGTTGTATTGACAAAGGGCTTTACCTCGTCTTCGAGCTTTCCTCCAAAGGTTCTGTTGCCTCTCTTCTTCATGATCAAAGCTTGCCTCCCATGGACTGGAAAACCAGACATAAGATAGTTCTTGGGACTTCTCGTGGCCTCCATTACTTGCACCAAGGCTGCAAAAGAAGGATAATCCATAGAGACATCAAGGCCTCAAACATTCTATTAACTTCAGATTTTGAACCACAGATATCTGATTTCGGGCTGGCAAAATGGCTTCCGAATCAATGGACTCATCATTCAATAGCCCCAATAGAAGGGACATTTGGGCATTTAGCACCAGAGTACTATTTACATGGAATAGTGGATGAGAAAACAGACGTGTTTGCTTTTGGGGTTTTCTTGCTTGAAGTCATCTCAGGGAGGAAACCGGTGGACGGTTCTCACCAAAGCTTACACAACTGGGCAAAACCATTATTGAACAAAGAGGAAACAGAAAAGCTGGTGGATCCAAAGCTAGAAGGGGCCTATGATTTAGCTCAGTTACAAAGACTTGCTTTTGCAGCTTCTCTCTGTATTCGAGCTTCTGCAACTTGGCGACCTACCATGAGCCAGGTATTAGAGGTAATTGAGGAGGGAGAAATGGACAAGGAGAAGTGGAAGATGCCAGAGGAGGAGGAAGAGCAAGAAGAAGAATTCTGGGGATTTGAGGATCTTGAATATGAATATGAAAGTTCATTCTCTCTCTCTCTACCAGACTCCATTGGAAGCTCTTAA 1146 0.4494 MKYLRTSSLKRLFSLKRRSFTEEVPPGDEKVENLQVLPAPEQPSSQRPTWKCFSYEELFDATNGFSSENLVGKGGYAQVYKGTLKNGYEIAVKRLTRACSSDERKEKEFLTEIGTIGHVNHPNVLPLLGCCIDKGLYLVFELSSKGSVASLLHDQSLPPMDWKTRHKIVLGTSRGLHYLHQGCKRRIIHRDIKASNILLTSDFEPQISDFGLAKWLPNQWTHHSIAPIEGTFGHLAPEYYLHGIVDEKTDVFAFGVFLLEVISGRKPVDGSHQSLHNWAKPLLNKEETEKLVDPKLEGAYDLAQLQRLAFAASLCIRASATWRPTMSQVLEVIEEGEMDKEKWKMPEEEEEQEEEFWGFEDLEYEYESSFSLSLPDSIGSS 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0943 381 SUPERFAMILY Protein kinase-like (PK-like) 43 333 IPR011009 -
Lele18g0943 381 ProSiteProfiles Protein kinase domain profile. 65 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0943 381 PANTHER OS08G0249100 PROTEIN 39 362 - -
Lele18g0943 381 Gene3D Phosphorylase Kinase; domain 1 36 142 - -
Lele18g0943 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Lele18g0943 381 Pfam Protein tyrosine and serine/threonine kinase 68 331 IPR001245 GO:0004672|GO:0006468
Lele18g0943 381 ProSitePatterns Protein kinases ATP-binding region signature. 71 93 IPR017441 GO:0005524
Lele18g0943 381 SMART serkin_6 65 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0943 381 Gene3D Transferase(Phosphotransferase) domain 1 144 359 - -
Lele18g0943 381 FunFam Putative receptor-like serine/threonine-protein kinase 33 142 - -
Lele18g0943 381 FunFam Putative receptor-like serine/threonine-protein kinase 144 358 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0943 Lele-ChrLele18 6093422 6097052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0943 44 334 Trihelix Transcription Factor Family AT5G38560 44.186 3.07e-73 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele18g0943 PK_Tyr_Ser-Thr 4.3e-41 CL0016