Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0937 ATGAACAGCTTTGATCCGCAGAGAGAAGAATCTTCCTCCTTCAAACCCACATATCAGAATATTAATAACAATAATCTTATGGCTAGTTCTGCAACTCCATCCTCTTCTTCTTCTTCTACTTATTCGGCTTCTTTCTCTGCTGCTAATAACCCTACCAAAAACAATGCTTCCCACTTTACTCACAATAATAAGTTCCATGGCTTCCCTGAGCTTGACGACCACGATCTCGCGGCCAACGTTGTCCCTGCCGTGACTGTGGTCCTGGAGGGCCGTTCCATCTGCCACCGCATCAACCTCCACCACCATGCCAGCTACCACAGCCTCGCCAAGGCTCTCCGTCAGATGTTTGTCGTCGACCAGGGAATGGCGGCTGATGACGGCGATCTTGATCTTTCCAATGCCATTCCAGGTCATCTTATTGCTTATGAAGATATGGAGAATGATCTTCTTCTCGCAGGCGATCTCAACTGGAAGGATTTCGTGCGTGTGGCAAAGAGAATTCGAATAATTCCAGCCAAGGAAAACTCAAGGAAGGCCACAAGAAGAGCATGA 552 0.4764 MNSFDPQREESSSFKPTYQNINNNNLMASSATPSSSSSSTYSASFSAANNPTKNNASHFTHNNKFHGFPELDDHDLAANVVPAVTVVLEGRSICHRINLHHHASYHSLAKALRQMFVVDQGMAADDGDLDLSNAIPGHLIAYEDMENDLLLAGDLNWKDFVRVAKRIRIIPAKENSRKATRRA 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0937 183 ProSiteProfiles PB1 domain profile. 81 174 IPR000270 GO:0005515
Lele18g0937 183 Pfam AUX/IAA family 62 179 IPR033389 -
Lele18g0937 183 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 71 174 IPR003311 GO:0005634|GO:0006355
Lele18g0937 183 MobiDBLite consensus disorder prediction 1 33 - -
Lele18g0937 183 SUPERFAMILY CAD & PB1 domains 93 169 - -
Lele18g0937 183 Gene3D - 78 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0937 Lele-ChrLele18 6033216 6034745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0937 20 178 B3 DNA Binding Superfamily AT5G62000 26.250 1.04e-06 46.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele18g0937 AUX_IAA 3.3e-14 CL0072