Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0918 ATGAGTTTCCACCCTAATACTTCTCTTCACTTAAATCTCCCAGAAGACAATAATGCTCCATTACTGAACCTAAATCTTCTTCTCGAGCCTTCTTCTTTTTCTGCTTCTTCATGTTCATCACCTACAGGTTTCAACACCAACAAGGAGCCCAGGGTTTTCTCGTGCAATTATTGCCAGAGAAAATTTTACAGCTCTCAGGCTCTTGGTGGTCACCAGAATGCTCACAAGCTTGAACGAACCCTAGCCAAGAAAAGCAGAGAGCTAATAAGTAGTTCTTCTTCTTCCTCCTTTGAAACTTACAATAATGGCGGATCGGACCTTCTTAGCCATCGGGTCGGGTCATCATCAGGGCTTGGCTTGTTCGTCAACCAAGCTGGTCAAGGTGGAAGGATGAAGAAGACAAGGGATTTTAGCTATGGTTCCAAGGAAATTGTTCAGGAGGATATTAGCCAGCTTGATCTCTCTTTAAGGCTCTAG 477 0.4382 MSFHPNTSLHLNLPEDNNAPLLNLNLLLEPSSFSASSCSSPTGFNTNKEPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELISSSSSSSFETYNNGGSDLLSHRVGSSSGLGLFVNQAGQGGRMKKTRDFSYGSKEIVQEDISQLDLSLRL 158
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0918 158 FunFam Zinc finger protein 2 30 100 - -
Lele18g0918 158 PANTHER C2H2 AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN 18 95 IPR044246 GO:0009788
Lele18g0918 158 ProSitePatterns Zinc finger C2H2 type domain signature. 55 75 IPR013087 -
Lele18g0918 158 ProSiteProfiles Zinc finger C2H2 type domain profile. 53 80 IPR013087 -
Lele18g0918 158 SUPERFAMILY beta-beta-alpha zinc fingers 50 80 IPR036236 -
Lele18g0918 158 Gene3D Classic Zinc Finger 35 105 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele18g0918 Lele-ChrLele18 5932431 5932907 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0918 1 158 C2H2 Transcription Factor Family AT5G57520 51.515 2.35e-33 113
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele18g0918 None None None