Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0912 ATGCTCTGTGACAACAAGATTCACTCCGCCAATAAGCTTGCTTCGCGGCATGAGCGTGTGTGGATGTGTGAGGTTTGCGAGCAAGCCCCTGCCTCCGTCACTTGCAAGGCCGACGCTGCCGCGCTCTGCGTCACGTGTGATTCTGATATCCACTCCGCCAATCCGCTGGCTCGCCGTCACGAGCGTGTCCCCGTGGAGGCCTTCTTTGATTCCGCCGACTCTATGGCGAAAGCCTCCGCTGCTGCCTTTAACTTGTTGGTTCCAACTGATAACGGAATTGGATCCGATGGATTCCCACAGGATGGATCCGAATCAGCATCATGGCTGATTTCCAATCAGAATTACAACCCGAAGATCATGGATGTTCCGGATATCAAATCGGTCGATTTGTTTTTCCCGGAAATGGAGTATCCATTCCTGGATTTCGATTACTCGAACTCCTTCGATCAGAATAACAATAACATAGCGGGTAATAATAATGATAGCGTAGTTCCAGTTCAAGCTCCGGTTATGTATCACACAGAGAGTTGCTTCGACATCGATTTTTGCAGATCGAAGCTCTCTTCCATTAGCTACCCAACGCAGTCATTTAGTCGCCCATGTGTCTCATCCACTTCGGTTGATGTCGGAGTGATCCCGGACGGAGGAAAGACTGTGTCAGAAATCTCGTTCCCGTTCGGCAGGAACATGAGTAACAGTTCGGAATCAAGCGGAATGATATCGGCGGGCAATTCAACAAACCAATCGGGAAGTTCCCTGAGTGGTGGTATGAACAGGGAAGCTCGGGTTTTGAGATACAGGGAGAAGAGGAAGAACCGGAAGTTCGAGAAAACCATACGGTACACTTCGAGAAAGGCTTATGCAGAAACTCGGCCGAGGATCAAAGGGCGGTTCGCTAAACGGACCGATATGGGGTCGGATTTCGACCCGCTCTTCAGCTCGATCGACCCCACCACAGATCTATTGCTCGATACTCAGTACGGCGTCGTCCCCTCGTTTTAA 1002 0.506 MLCDNKIHSANKLASRHERVWMCEVCEQAPASVTCKADAAALCVTCDSDIHSANPLARRHERVPVEAFFDSADSMAKASAAAFNLLVPTDNGIGSDGFPQDGSESASWLISNQNYNPKIMDVPDIKSVDLFFPEMEYPFLDFDYSNSFDQNNNNIAGNNNDSVVPVQAPVMYHTESCFDIDFCRSKLSSISYPTQSFSRPCVSSTSVDVGVIPDGGKTVSEISFPFGRNMSNSSESSGMISAGNSTNQSGSSLSGGMNREARVLRYREKRKNRKFEKTIRYTSRKAYAETRPRIKGRFAKRTDMGSDFDPLFSSIDPTTDLLLDTQYGVVPSF 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0912 333 Pfam CCT motif 259 301 IPR010402 GO:0005515
Lele18g0912 333 MobiDBLite consensus disorder prediction 235 256 - -
Lele18g0912 333 ProSiteProfiles Zinc finger B-box type profile. 18 65 IPR000315 GO:0008270
Lele18g0912 333 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 3 304 IPR045281 GO:0009909
Lele18g0912 333 Pfam B-box zinc finger 20 65 IPR000315 GO:0008270
Lele18g0912 333 CDD Bbox1_BBX-like 23 65 - -
Lele18g0912 333 MobiDBLite consensus disorder prediction 235 257 - -
Lele18g0912 333 ProSiteProfiles CCT domain profile. 259 301 IPR010402 GO:0005515
Lele18g0912 333 SMART bboxneu5 18 65 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0912 Lele-ChrLele18 5881560 5882666 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0912 1 333 C2C2-CO-like Transcription Factor Family AT5G57660 49.271 3.65e-92 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Lele18g0912 zf-B_box 4e-07 No_clan