Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0910 ATGGCGAGCCCAAATTACCGTTACCATGGTTACCTTATAATGATTTCTTGTGTCGTGTTGTTAACAGCTGAGATTATTGGAGCAAGCGATGATGATGGAGGGTCACAGCTCCTAGGAGGGAAGAAGTTGATAATTGGTGTTCCTAAGAAAGTAAGCTTCATTCAGTTTGTGGATACACAACTGAATCCTTGGAACAAGACTCAGCTCGTGAATGTTACTGGCTATTCTATTGACGTTTTCTGTGCTACAATAGCTTACTTTCAGCGTTCAAATTACAATATTTCTTTCGAGTTTCGTGCTTTTGTAGACCAAAATGGAAACACTCCTGGGGGTTATGATGCACTCGTCTACCAGGTTCACCAAGGAAAGTACTATGCTGCAGTGGCAGATTTGTCGATCGTGGCAAATAGGTCAAACTTCGTAGATTTTACGTTACCATATGCACAGTCGGATGTGAGGATGCTTGTCAAAGTCCGACATGATCCACGCTTGCATATGTGGATTTTCTTACGACCATTCAGTTGGGACATGTGGTTGTGCACCGTCCTGGTCTGTATTTTTACAGGAGGTGTCATAGTATTCATGGAACGCAATGTCAAGCCAAATTCAACACTTGAAAATTCTCCCATTAAGAAACAACTTAGTGGGGTTTCTATCCTGTCGCTTCCCCTACTGCAAGCAGTTTTTCCTGAAAGAGAATCATTGGCCAAGAACTGCTCTAGGTTTGTGCTTGTGATGTGGTTGATTTTGGTCTCTGTATTAATGCAAAGTTTCACGGCATGCTTGTCATCAATCTTGACAGTTCATCAGCTCCAATCTCGTTACCCTAGTGAGTATGCCATTAGAACAGACCCTGATATTCACGTTGGATGCCATTATGGCTCATTCATCAACGGCTTATTGGTTGATAGCTTGAAAGTTGATAGTTCAAGGGTAAAGGAATACTCTGGCATCAAAGAGTATAAGGAGGCCTTAGACAAAGGAAGTCGTAAGGGTGGTGCCGACGCCATTTTTGATGAAGTTCCCTACATTAAAGTCTTCCTTAAGAAATATGGTTCAAATTATGCCATGGTAGGGCCTAGGCATCGCACTGGTGGATTTGGCTTTGCATTTCGTAAGGATTCAACCTTAACATCGTACTTTTCTCAAGCCATATTAAATATAAGTGAGAGTAATGAAATGGACGACATTCAGGATAGATATTTCAAAACAGCTCGTGACGATGATGGCATATCAACTTCATCGTTAGAAGATGATAGTCCCAGCCTCACGGCATATAGCTTTGCAGGTTTGTTTGTAGTATTCGGAATTCTTTCATTGTTAGCTTTGTTAGTCTCTGAACATCGCACTTGGACAATACATGTTCTGCTAATGAAAATGTATAGCAAAACATTCTTGAGTTGGAGTTCTACAAGAATTGATGTGACAGAGGAAGGTTCTGCAACAAGAAGAGATGTTGATGATGGAGAAGGTTCTATAAACAGAGAAAATATTGGAGCAGAAGATGCAGAATATAACCACACAAAGATAACGGTGACATCTCTTACCTAA 1551 0.4094 MASPNYRYHGYLIMISCVVLLTAEIIGASDDDGGSQLLGGKKLIIGVPKKVSFIQFVDTQLNPWNKTQLVNVTGYSIDVFCATIAYFQRSNYNISFEFRAFVDQNGNTPGGYDALVYQVHQGKYYAAVADLSIVANRSNFVDFTLPYAQSDVRMLVKVRHDPRLHMWIFLRPFSWDMWLCTVLVCIFTGGVIVFMERNVKPNSTLENSPIKKQLSGVSILSLPLLQAVFPERESLAKNCSRFVLVMWLILVSVLMQSFTACLSSILTVHQLQSRYPSEYAIRTDPDIHVGCHYGSFINGLLVDSLKVDSSRVKEYSGIKEYKEALDKGSRKGGADAIFDEVPYIKVFLKKYGSNYAMVGPRHRTGGFGFAFRKDSTLTSYFSQAILNISESNEMDDIQDRYFKTARDDDGISTSSLEDDSPSLTAYSFAGLFVVFGILSLLALLVSEHRTWTIHVLLMKMYSKTFLSWSSTRIDVTEEGSATRRDVDDGEGSINRENIGAEDAEYNHTKITVTSLT 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0910 516 Pfam Ligand-gated ion channel 404 437 IPR001320 GO:0015276|GO:0016020
Lele18g0910 516 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 40 448 - -
Lele18g0910 516 SUPERFAMILY Periplasmic binding protein-like II 17 403 - -
Lele18g0910 516 SMART GluR_14 42 404 IPR001320 GO:0015276|GO:0016020
Lele18g0910 516 Gene3D - 167 282 - -
Lele18g0910 516 Gene3D - 35 166 - -
Lele18g0910 516 Pfam Bacterial extracellular solute-binding proteins, family 3 72 403 IPR001638 -
Lele18g0910 516 Gene3D - 298 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0910 Lele-ChrLele18 5845039 5848207 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0910 40 445 Ion Channels AT2G29120 36.453 1.74e-67 232