Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0904 ATGGTGATAACGGTAGGAGAAGCTTCTCTTTCTCCCCTCTGGTACAGTCGTCTCAACTTCAAAACATCTTCTAGATTCAGAAGTTGCTTCGCCCGAGCTAGTATCTCCATCCAGAGAAGACCCAACAACACCCACTCGTGGAATCCTGGGCACCTCTCTACCAGCAATGAGGCAGCAAATTTTGATCCCTTGGGTATTAATTCGGATTTATCTTCTGCTCTGAACTCTTCTTGGGAAAATTTGGTATGCCTGTTCTCACAAACATTTCAGAGTTCTTCAAGTACTGAGAAGGGAAAACCTAACTCTTCTCGAGGTTTAGCAGCTGCAATAGAGGATAGTTCAATTGATTTTGGGGACTTCTTCAAAGGTCCATTGCCAGGAAAGTTTCTCAAGCTTTTAGGACTTCTTGCTTTGTCAAGGCTTGGTGTATACATACCACTGGGTGGGGTTAACAGGGATGCTTTTGTTGGCAATTTGGACCAGAACAGTTTATTAAGCACTCTAGACTCTTTTTCTGGAGGAGGTATTGGAAGACTTGGGATATGCTCTCTTGGTATTGTCCCCTTCATTAATGCCCAAATTGTGTTTCAACTTCTTGCACAAGTATATCCTAAGCTGCAAGATCTTCAAAAAAGAGAAGGTGAATCAGGAAGAAAGAAAATTCTTCAGTACACAAGATATGCCTCAGTTGGATTTGCCGTTGTTCAGGCAATTGGTCAAGTACTCTACCTACGTCCTTATGTCAATGATTTTAGTGCACAATGGGCTGTGTCTTCTGTTATCTTATTGACTCTTGGATCTGTATTTACAACATATATTGGTGAGCGAATTTCAGACCTAAAACTTGGGAATGGCACATCGCTTTTGATATTCACAAACATTATCTCTTACTTGCCTGCCTCTTTTGGAAGAACATTTGAAGCGGAGAGAAAGATTCCTCTCAACTATGCTTCAAGATACTCAAGCAGAAGCAGAGGACTTGATAAATCTGCTTACCTACCCTTTAAGGTAAATAGTTCTGGAGTGATGCCCATCATATTTTCTACATCATCATTAGCCCTTCCTGGTACTTTGGCGCGTTTCACTGGCATAAATGCTCTGAAGAAAGCTGCACTGGCTTTCAATCCTGGGGGTTCCTTTTATCTTCCAATGAACATCCTTTTAATAGCGTTCTTCAACTATTATTACACTTTCCTACAATTGGACCCTGATGATTTGAGTGAACAATTGAAACGTCAAGGGGCATCAATTCCACTTGTACGACCGGGAAAAACGACTGCCATCTATATTAAAACAGTTCTTAGTCGAATATCAGTTCTCGGTTCAACATTTCTGGCGATTTTAGCTGCCGGACCAGCTGTTGTTGAGCAGGTTACGCACCTGACTGCATTTAGGGGATTTGCTGGAACGTCTATTCTTATTCTTGTCGGTTGTGCCACAGACACAGCAAGAAAAGTTCAAGCTGAGATCATATCCCAGAAGTACAAGAACATAGAATTCTATGACTTCGACAAGTATTGA 1521 0.4155 MVITVGEASLSPLWYSRLNFKTSSRFRSCFARASISIQRRPNNTHSWNPGHLSTSNEAANFDPLGINSDLSSALNSSWENLVCLFSQTFQSSSSTEKGKPNSSRGLAAAIEDSSIDFGDFFKGPLPGKFLKLLGLLALSRLGVYIPLGGVNRDAFVGNLDQNSLLSTLDSFSGGGIGRLGICSLGIVPFINAQIVFQLLAQVYPKLQDLQKREGESGRKKILQYTRYASVGFAVVQAIGQVLYLRPYVNDFSAQWAVSSVILLTLGSVFTTYIGERISDLKLGNGTSLLIFTNIISYLPASFGRTFEAERKIPLNYASRYSSRSRGLDKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGINALKKAALAFNPGGSFYLPMNILLIAFFNYYYTFLQLDPDDLSEQLKRQGASIPLVRPGKTTAIYIKTVLSRISVLGSTFLAILAAGPAVVEQVTHLTAFRGFAGTSILILVGCATDTARKVQAEIISQKYKNIEFYDFDKY 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0904 506 Pfam SecY 181 306 IPR002208 GO:0015031|GO:0016020
Lele18g0904 506 Pfam SecY 307 482 IPR002208 GO:0015031|GO:0016020
Lele18g0904 506 Hamap Protein translocase subunit SecY [secY]. 117 499 IPR026593 -
Lele18g0904 506 ProSitePatterns Protein secY signature 2. 272 289 IPR030659 -
Lele18g0904 506 SUPERFAMILY Preprotein translocase SecY subunit 121 489 IPR023201 -
Lele18g0904 506 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 306 498 IPR002208 GO:0015031|GO:0016020
Lele18g0904 506 ProSitePatterns Protein secY signature 1. 180 199 IPR030659 -
Lele18g0904 506 Gene3D SecY subunit domain 307 495 IPR023201 -
Lele18g0904 506 Gene3D SecY subunit domain 120 306 IPR023201 -
Lele18g0904 506 PRINTS Preprotein translocase SecY subunit signature 129 147 - -
Lele18g0904 506 PRINTS Preprotein translocase SecY subunit signature 253 278 - -
Lele18g0904 506 PRINTS Preprotein translocase SecY subunit signature 179 199 - -
Lele18g0904 506 PRINTS Preprotein translocase SecY subunit signature 221 244 - -
Lele18g0904 506 PRINTS Preprotein translocase SecY subunit signature 279 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0904 Lele-ChrLele18 5734273 5737827 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0904 17 506 Chloroplast and Mitochondria Gene Families AT2G18710 76.136 0.0 785