Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0903 ATGGAATTCGAGAAAGAGAAAATTGTCAGATTCTTCTCGGATGGCACAAATCATAAGGAAGAGGAACCACTGTGGCGAGGAACTGAACTATCAGCACTGGAAAAGCCATCATCTGGATACAGTGTTTCTTTAGCTTCCTCGCTAAAGCAAGACAATGCACTAACTTGGGGGAAAAATAGATTAGTTGAAACATTTAAAGTTGAGGGATCTAAGGCGTTTCCGGAGGACCCTGAGCCATGGCGCAAAAGGATACTGGATCCATCCAGTGAGATTGTGTTGAAATGGAATCGGGTCTTTATAGTTTCGTGCTTGATGGCTCTTTTTGTAGACCCCTTGTATCTTTACTTGCCCAGCGTGAGAAGACTTGCAGGGTCTTCATGTGTGAGGACAGACTTCAACTTACGGATTGCTGTGACCCTTTTACGGACAGTCACAGACTTCTTTTATCTATTACACTTGATAATTAAGTTCCGGACAGCATATGTGGCACCTAGCTCGCGGGTATTTGGTCGGGGTGAACTTGTGACGGACCCAAAGAAAATTGCAAGAAGATATATCAAATCCGATTTCTTCATTGATTTTATTGCTACTCTGCCTCTTCCCCAATTGCTCATTTGGTTTATTATACCAGCAACAAGAAGCCCTCTTGCTGATCAAAATAATAATGCTCTGGCATTGATAGTTCTGCTCCAATATGTTCCAAGATTATATTTGATCTTTCCACTAAGTTCTGAAATAATTAAAGCAACTGGAGTGGTTACAAAGACTGCATGGGCAGGAGCTGCATATAATCTGCTGTTGTATATGCTGGCCAGTCATGTTTCAGGAGCAGCATGGTATCTTCTATCAGTGGACCGTTATACCTATTGTTGGAAATCTTTTTGCAAAAAGGATTCTAGTCCTAAAGAATGCTTTCTTTACCTGGACTGTGATTCTCTTAACCTTGAGCCGCGCAAAATTTGGGCAAATGTAACAAGTGTGTTTAACAACTGCAATCCCAGTAAAGAACAATTTAAGTTTGGCATATTCGAATTTGCAGTGTCAAAACATGTTGTCTCCACAAACTTCATCTCAAAGTACTTCTATTGTCTATGGTGGGGTTTGCAGCAACTTAGTTCTTATGGACAGAACTTGGAGACGAGCACTTTTATGGGCGAGACATCATTTTCCATTCTGATTGCCATCCTGGGTCTTGTGTTGTTTTCCCATTTGATTGGGAACATGCAGACATATTTGCAATCAACCACCATAAGGCTTGAGGAGTGGAGGCTCAAGCGAAGAGACACTGAAGAGTGGATGAGACATCGCCAACTCCCTGAAGATTTGAAACGGCGTGTTCGAAGATTTGTTCAGTATAAGTGGCTTGCAACTCGAGGAGTTGATGAAGAAACAATTCTACGGGGATTACCTGCTGATCTTCGCCGTGATATCCAACGCCACCTATTCTTAGACCTTGTTCGACGGGTTCCCTTCTTCTCACAGATGGATGATCAACTACTAGATGCAATATGTGAGCGGCTGGAATCCTTTTTGAGCACTCAAGGCACCTACATTGTTCGAGAGGGAGACCCTGTGACGGAAATGCTCTTTATTGTCAGAGGTAGACTAGATAGTTCTACTACAAATGGCGGTCGGAGTGGTTTCTTCAATTCAATCATATTGAGACCTGGAGATTTTTGTGGCGAGGAGCTACTTGCTTGGGCGTTGCTTCCAAAATCAACCGTGAACCTGCCTTCTTCAACCAGGACTCTTAAATCTCTCACCGAAGTTGAAGCTTTTGCTCTTCGAGCCGAGGACCTCAAGTTCGTGGCGAATCAATTTAGGCGCCTCCACAGCAAGAAGCTGCAGCACACCTTCCGGTTTTATTCCCATCATTGGAGGAGTTGGGCTGCCTGCTTCATTCAGGCCGCATGGCGTCGGTATAAGAAACGGATGTCTGCCAAAGATCTCGCTTTTAGGGAATCTTTCAATATGGATGAGAATGTGGCCAATGAGACAGAACAAGGGGATGAAAGCCCTGCTCATTCAAATTCTTCTCAAACTAAATTAAACCTTGGGGTCACATTACTTGCCTCAAGGTTTGCTGCAAACACAAGAAGGGGAGCTCTTAAGATGAAAGATGACATGCCAAAACTACAAAAACCTGAAGAACCTGACTTTACTGTTGAAGCTGATGATGACTAG 2184 0.4336 MEFEKEKIVRFFSDGTNHKEEEPLWRGTELSALEKPSSGYSVSLASSLKQDNALTWGKNRLVETFKVEGSKAFPEDPEPWRKRILDPSSEIVLKWNRVFIVSCLMALFVDPLYLYLPSVRRLAGSSCVRTDFNLRIAVTLLRTVTDFFYLLHLIIKFRTAYVAPSSRVFGRGELVTDPKKIARRYIKSDFFIDFIATLPLPQLLIWFIIPATRSPLADQNNNALALIVLLQYVPRLYLIFPLSSEIIKATGVVTKTAWAGAAYNLLLYMLASHVSGAAWYLLSVDRYTYCWKSFCKKDSSPKECFLYLDCDSLNLEPRKIWANVTSVFNNCNPSKEQFKFGIFEFAVSKHVVSTNFISKYFYCLWWGLQQLSSYGQNLETSTFMGETSFSILIAILGLVLFSHLIGNMQTYLQSTTIRLEEWRLKRRDTEEWMRHRQLPEDLKRRVRRFVQYKWLATRGVDEETILRGLPADLRRDIQRHLFLDLVRRVPFFSQMDDQLLDAICERLESFLSTQGTYIVREGDPVTEMLFIVRGRLDSSTTNGGRSGFFNSIILRPGDFCGEELLAWALLPKSTVNLPSSTRTLKSLTEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRSWAACFIQAAWRRYKKRMSAKDLAFRESFNMDENVANETEQGDESPAHSNSSQTKLNLGVTLLASRFAANTRRGALKMKDDMPKLQKPEEPDFTVEADDD 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0903 727 Pfam Cyclic nucleotide-binding domain 514 602 IPR000595 -
Lele18g0903 727 FunFam Cyclic nucleotide-gated ion channel 1 489 607 - -
Lele18g0903 727 SUPERFAMILY Voltage-gated potassium channels 86 413 - -
Lele18g0903 727 CDD CAP_ED 491 622 IPR000595 -
Lele18g0903 727 PRINTS EAG/ELK/ERG potassium channel family signature 404 413 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele18g0903 727 PRINTS EAG/ELK/ERG potassium channel family signature 153 162 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele18g0903 727 PRINTS EAG/ELK/ERG potassium channel family signature 270 280 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele18g0903 727 PRINTS EAG/ELK/ERG potassium channel family signature 386 397 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele18g0903 727 PRINTS EAG/ELK/ERG potassium channel family signature 454 461 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele18g0903 727 PRINTS EAG/ELK/ERG potassium channel family signature 360 377 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lele18g0903 727 ProSiteProfiles cAMP/cGMP binding motif profile. 491 574 IPR000595 -
Lele18g0903 727 Pfam Ion transport protein 95 417 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele18g0903 727 Gene3D Jelly Rolls 489 609 IPR014710 -
Lele18g0903 727 MobiDBLite consensus disorder prediction 701 727 - -
Lele18g0903 727 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 75 720 - -
Lele18g0903 727 MobiDBLite consensus disorder prediction 701 719 - -
Lele18g0903 727 SMART cnmp_10 491 622 IPR000595 -
Lele18g0903 727 Gene3D - 112 415 - -
Lele18g0903 727 FunFam Cyclic nucleotide-gated ion channel 1 418 482 - -
Lele18g0903 727 Gene3D Helix hairpin bin 419 481 - -
Lele18g0903 727 SUPERFAMILY cAMP-binding domain-like 421 613 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0903 Lele-ChrLele18 5728199 5733038 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0903 1 726 Ion Channels AT4G30360 66.757 0.0 978