Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0902 ATGCTCTCGAGATCTTCCTTAGACTTACTGAATTTGGTCTCCATCGATGATTACAGAACTCTGAGCCGGATCCCAAAAGATATGGCCCTCCCCGGAGTTCTGCCCAAATTCGAAGTCCGCGATGATGCCGATTCCGGTGCGGGCTGCGACGATATCGTCTCCCCTGTTCCTCAAGAACGCAGGATCATCGTCGCCAATCAGTTACCGATAAAATCGTTTCGTGACAACGAGACCAGAAAATGGAGTTTCGAATTGGATAGTGATAGTCTCTATCTCCAGCTCAAAGACGGGTTTCCCTCCGACGTCGAGGTTCTCTATGTGGGTTCCTTGAAAGCCGACATCGATCCATCGGAACAAGAAGAAGTGTCTCAAATATTACTTGAAAAGTTCCGATGCGTGCCGACGTTTTTACCAGTTGAGATTCAGAACAAGTTCTACCATGGATTCTGCAAGCATTACCTCTGGCCTCTGTTTCACTACATGTTACCTATGTCGCCGAGTCACGGTGCCCGTTTCGAACGCTCTCAGTGGAAAGCTTACGTTTACGCCAACAAGATTTTCGCCGATAAGGTAACGGAGGTGATAAACCCAGAGGAAGATTACGTTTGGATTCACGATTATCATCTCATGATCTTACCTACCTTATTGAGAAGAAGGTTCCACAGAATCAAACTCGGATTTTTCCTCCACAGCCCATTTCCATCCTCTGAAATCTACAGAACTATCCCAGTTCGTGATGATATCCTTCGTGCTCTGTTAAATTGCGATTTAGTCGGTTTCCATACGTTTGATTATGCGAGACATTTCTTGTCCTGTTGCAGTAGAATGCTGGGTTTGGATTATGAATCCAAGAGGGGTTACATTGGGCTAGATTATTACGGCCGTACAGTGACGATCAAGATCTTGCCTGTGGGGATTCATATGGGTCAGCTCCAATCGTCGTTATCTTTATCTCGTACTCGTGATAGGATTAAAGAATTGCAGAAACAATACGAGGGGAAGATCGTTATTCTGGGTGTGGACGATATGGATTTGTTCAAAGGTTTAAGCTTGAAGTTACTGGCAATGGAACAACTCTTGGAGGTTAACGAAGATTTAAGGGGTAAAGTAGTTTTAGTTCAGATTCTGAACCCAGCAAGAAGCAAAGGGAAAGATATTCAAGATGTTCAAAATGAAACAAATTCAATCGCGAATGAGATCAACCAGAAATACGGCGAACCTGGTTACCAACCAATCGTGTTCGTTAACGGACCTGTTTCGACTCAGGAGAAAGCCTCGTACTTCGCCATTTCTGAATGCTGCGTTGTGAATGCTGTAAGAGATGGTATGAATTTAGTTCCTTACAAGTACACTGTTTGTAGACAGGGGACCGATGCAACAACAAATGATTCGACAAGTCCTAAACGAAGTGTCATCATAGTGTCTGAATTCATCGGTTGTTCTCCGTCCCTAAGCGGAGCAATCAGAGTGAACCCATGGAACATAGAAGACGTCGCAGAGGCTATGAATTCGGCGATTACAATGTCAGAGGCAGAGAAACAACTGCGTCACGAAAAACATTACAAGTACATAAGCTCGCATGATGTAGCCTATTGGGCTAGAAGCTTCGATCAGGATTTAGAAAGAGCTTGTAGAGAACATTACCATAAGAGATGTTGGGGTGTTGGTTTTGGCTTGGGATTTAGAATCGTCGCTCTTGATCCTACATTCAGGAAGCTTTCTGCAGAAAACATTGTATCTGCGTATAGAAACACACAGAGCAGGTTGATCCTTTTAGATTACGACGGTACGATGATGCTACAGGCTTCAGTCGACAAAGCCCCAAGCGAAGAGGTTATTTCAGTGTTGAATCACTTATGTAGTGACCCCAGAAACGTAGTGTTCATAGTTAGCGGCAGAGATAAGAATTGCCTCAGCAAGTGGTTTTCTCCATGCCAGAAGCTGGGCCTTTCAGCAGAGCATGGCTTCTTTACCAGGTGGAGTTGTGATAGTCCTTGGGAAACATGTGGGTTAGGAATAGATTTCGAATGGAAAAAGGCTGTAGAACCGGTGATGGCGCATTATACAGAAGCAACTGATGGTTCTTTCATTGAATCAAAAGAGAGTGCTTTGGTTTGGCACCACCAAGAAGCCGACCCTCATTTCGGATCATCCCAAGCAAAAGAGCTTCTGGATCACCTCGAAAGCGTGCTAGCCAATGAACCAGTAGTAGTAAAAAGAGGACAAAACATCGTTGAAGTAAAACCTCAGGGTGTGAGCAAAGGCATAGTAGTGGAGAATCTAATCTCAACGATGCAGAGTAAGGGAAAGGCACCGGGTTTTCTTTTGTGCATAGGAGATGATAGGTCAGATGAAGATATGTTTGAGAGCATCGCTGGTTCAATCTCTGATCCAACCCAACAAGCCATAAAACATGTCTACGCCTGCACTGTGGGTCAGAAGCCAAGCATGGCAAAATATTATCTGGATGACCCAGTGGAAGTCATCAAGTTACTCCAAGGATTATCCTCTGCATCATCATCAACCCCAAAGCCCCTACACTCTCAGGATCTTGATAGATACATAAACTTAACATAG 2577 0.4439 MLSRSSLDLLNLVSIDDYRTLSRIPKDMALPGVLPKFEVRDDADSGAGCDDIVSPVPQERRIIVANQLPIKSFRDNETRKWSFELDSDSLYLQLKDGFPSDVEVLYVGSLKADIDPSEQEEVSQILLEKFRCVPTFLPVEIQNKFYHGFCKHYLWPLFHYMLPMSPSHGARFERSQWKAYVYANKIFADKVTEVINPEEDYVWIHDYHLMILPTLLRRRFHRIKLGFFLHSPFPSSEIYRTIPVRDDILRALLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLDYYGRTVTIKILPVGIHMGQLQSSLSLSRTRDRIKELQKQYEGKIVILGVDDMDLFKGLSLKLLAMEQLLEVNEDLRGKVVLVQILNPARSKGKDIQDVQNETNSIANEINQKYGEPGYQPIVFVNGPVSTQEKASYFAISECCVVNAVRDGMNLVPYKYTVCRQGTDATTNDSTSPKRSVIIVSEFIGCSPSLSGAIRVNPWNIEDVAEAMNSAITMSEAEKQLRHEKHYKYISSHDVAYWARSFDQDLERACREHYHKRCWGVGFGLGFRIVALDPTFRKLSAENIVSAYRNTQSRLILLDYDGTMMLQASVDKAPSEEVISVLNHLCSDPRNVVFIVSGRDKNCLSKWFSPCQKLGLSAEHGFFTRWSCDSPWETCGLGIDFEWKKAVEPVMAHYTEATDGSFIESKESALVWHHQEADPHFGSSQAKELLDHLESVLANEPVVVKRGQNIVEVKPQGVSKGIVVENLISTMQSKGKAPGFLLCIGDDRSDEDMFESIAGSISDPTQQAIKHVYACTVGQKPSMAKYYLDDPVEVIKLLQGLSSASSSTPKPLHSQDLDRYINLT 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0902 858 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 55 837 IPR001830 GO:0003824|GO:0005992
Lele18g0902 858 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 53 312 - -
Lele18g0902 858 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 545 - -
Lele18g0902 858 SUPERFAMILY HAD-like 588 833 IPR036412 -
Lele18g0902 858 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 587 704 - -
Lele18g0902 858 Gene3D - 716 849 IPR023214 -
Lele18g0902 858 Gene3D - 587 705 IPR023214 -
Lele18g0902 858 TIGRFAM T6PP: trehalose-phosphatase 587 835 IPR003337 GO:0003824|GO:0005992
Lele18g0902 858 Pfam Glycosyltransferase family 20 60 541 IPR001830 GO:0003824|GO:0005992
Lele18g0902 858 Gene3D Glycogen Phosphorylase B; 55 313 - -
Lele18g0902 858 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 717 849 - -
Lele18g0902 858 Pfam Trehalose-phosphatase 591 825 IPR003337 GO:0003824|GO:0005992
Lele18g0902 858 Gene3D Glycogen Phosphorylase B; 314 525 - -
Lele18g0902 858 FunFam Trehalose-6-phosphate synthase 2 671 750 - -
Lele18g0902 858 FunFam Alpha,alpha-trehalose-phosphate synthase 314 525 - -
Lele18g0902 858 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 589 791 IPR006379 -
Lele18g0902 858 CDD HAD_TPP 589 830 - -
Lele18g0902 858 CDD GT20_TPS 60 541 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0902 Lele-ChrLele18 5719444 5722192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0902 1 842 Trehalose Biosynthesis Gene Families AT2G18700 67.689 0.0 1199