Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0886 ATGGCTCTTCCTTGGGTTTATCTTCTCTTCTTCCTCTCTTGTTCTGGACTCTGTTTCTCTTACGAGCCTCGTAACCATGAAGTGGAGGCTTTGATAAGCATAAGAGCTTCTTTGAATGATCCTCATGGAGTATTAAGCAACTGGGATGAGAACTCAGTAGACCCTTGTAGTTGGGCTATGATCACGTGCTCTTCTGATTCCCTTGTTATAGGCTTCGGAGCTCCAAGCCAATCTCTTTCTGGAACTTTATCTGCTGCCATAGGAAATCTGACAAATCTTCGACAAGTGTTACTGCAGAACAACAATATATCTGGCCAAATCCCACCTGAACTTGGTACCCTTCCTAAGTTACAGACTTTAGATCTTTCTAACAATCGATTCTCTGGTGTGATTGCCAGTTCCTTAAGTCACTTGGATGGTCTCAAGTACTTGAGGCTGAACAACAATAGCTTGTCTGGGCCCTTTCCCGTGTCACTAGCCAAAATCCCCCAACTTGATTTCTTAGACTTGTCTTATAACAATCTCAGTGGACCTGTACCGAAGTTTCCGGCTCGATCTCTCAACGTTGTGGGAAACCCTTTAATTTGTGGAAGTAGCTCTACTGAAGGTTGCTCTGGATCAACAACCCTGTTGCCTGTTTCATTCTCTCTTCCACCTTCACAAGGAAAGCACAAGTCGAAGAAAATAGCGATTGCACTTGGGATTGGCCTTAGCTTTGCTTGTCTTACATTGTTGTCTTTAGGACTTTTCTGGTATAGAAAGAAAAGACAGCAGCGAGCGCTTTTGTATATCAGTGATTATCAGGAAGATGGACTTGTTCTCTTGGGGAATCTCAATATTTTCACTTTTAGAGAGCTCCAACATGCAACAGATAATTTCAGCTCTAAGAACATACTTGGTGCTGGTGGTTTTGGCAATGTGTATCTTGGTAAGCTCGGAGATGGGACGCTGGTTGCCGTGAAGAGGTTGAAGGATGTCACTGGAAGTGCCGGGGAGTCACAGTTTCGAACTGAATTGGAGATGATCAGCTTGGCAGTTCATCGCAACTTACTTCGCTTAATCGGATATTGTGCTACTCCTAACGAGAAGCTTCTAGTTTATCCTTACATGTCTAATGGAAGTGTAGCATCCAGACTTAGAGGCAAACCGGCGCTAGATTGGAACACGAGAAAGAGGATAGCGATTGGAGCTGCTAGGGGTCTTCTGTATCTACATGAGCAGTGTGATCCAAAGATAATACATAGAGATGTTAAGGCTGCTAATGTGCTTCTGGATGAGTACTATGAAGCCATTGTGGGGGATTTCGGCCTCGCTAAGCTCCTTGATCATGCTGACTCTCATGTCACTACCGCTGTCCGTGGCACCGTAGGCCACATTGCGCCAGAGTACCTCTCCACTGGCCAGTCATCAGAAAAAACTGATGTGTTTGGATTTGGCATTCTCTTGTTGGAGCTCATAACTGGAATGACGGCTCTCGAGTTTGGAAAAACAGTGAATCAGAAAGGTGCAATGCTAGAGTGGGTGAAGAAAATACAGCAAGAGAAGAAGGTGGAATTGTTGGTGGACAAAGAGTTAGGAAGAAACTATGATAGGATAGAGGTGGGGGAGATGTTGCAAGTAGCTTTACTTTGCACTCAGAATCTGCCGATCCACCGGCCCAAAATGTCAGAAGTGGTCCGAATGCTCGAAGGCGATGGCCTCGCCGACAAATGGGCGGCTTCACAGAATCACAATAATCTCAACAACACCTTTCACAGCCACAGTAACAACAATAGTTCATCTTCTCGCCCAAGCACCACAACCACCACCGCTTCTAAACATGATGATGATAATAATAATGTTCATGATCGTCCTACTATATTTGGCATGGGACTGGATGGTGATGATGATGATGAACACTCTTTGGATTCCTATGCCATGGAACTCTCTGGTCCTAGGTAA 1941 0.4482 MALPWVYLLFFLSCSGLCFSYEPRNHEVEALISIRASLNDPHGVLSNWDENSVDPCSWAMITCSSDSLVIGFGAPSQSLSGTLSAAIGNLTNLRQVLLQNNNISGQIPPELGTLPKLQTLDLSNNRFSGVIASSLSHLDGLKYLRLNNNSLSGPFPVSLAKIPQLDFLDLSYNNLSGPVPKFPARSLNVVGNPLICGSSSTEGCSGSTTLLPVSFSLPPSQGKHKSKKIAIALGIGLSFACLTLLSLGLFWYRKKRQQRALLYISDYQEDGLVLLGNLNIFTFRELQHATDNFSSKNILGAGGFGNVYLGKLGDGTLVAVKRLKDVTGSAGESQFRTELEMISLAVHRNLLRLIGYCATPNEKLLVYPYMSNGSVASRLRGKPALDWNTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANVLLDEYYEAIVGDFGLAKLLDHADSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMTALEFGKTVNQKGAMLEWVKKIQQEKKVELLVDKELGRNYDRIEVGEMLQVALLCTQNLPIHRPKMSEVVRMLEGDGLADKWAASQNHNNLNNTFHSHSNNNSSSSRPSTTTTTASKHDDDNNNVHDRPTIFGMGLDGDDDDEHSLDSYAMELSGPR 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0886 646 PRINTS Leucine-rich repeat signature 162 175 - -
Lele18g0886 646 PRINTS Leucine-rich repeat signature 117 130 - -
Lele18g0886 646 ProSitePatterns Protein kinases ATP-binding region signature. 299 321 IPR017441 GO:0005524
Lele18g0886 646 FunFam Somatic embryogenesis receptor-like kinase 1 370 582 - -
Lele18g0886 646 Pfam Leucine rich repeat 115 175 IPR001611 GO:0005515
Lele18g0886 646 Pfam Leucine rich repeat N-terminal domain 25 64 IPR013210 -
Lele18g0886 646 ProSiteProfiles Protein kinase domain profile. 293 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0886 646 SUPERFAMILY L domain-like 25 197 - -
Lele18g0886 646 Gene3D Transferase(Phosphotransferase) domain 1 370 582 - -
Lele18g0886 646 MobiDBLite consensus disorder prediction 578 607 - -
Lele18g0886 646 Pfam Protein kinase domain 294 558 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0886 646 Gene3D Phosphorylase Kinase; domain 1 263 369 - -
Lele18g0886 646 FunFam Somatic embryogenesis receptor kinase 1 263 369 - -
Lele18g0886 646 Gene3D Ribonuclease Inhibitor 24 206 IPR032675 -
Lele18g0886 646 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 7 573 - -
Lele18g0886 646 SMART serkin_6 293 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0886 646 MobiDBLite consensus disorder prediction 578 646 - -
Lele18g0886 646 SUPERFAMILY Protein kinase-like (PK-like) 275 563 IPR011009 -
Lele18g0886 646 FunFam Putative LRR receptor-like serine/threonine-protein kinase 24 206 - -
Lele18g0886 646 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0886 Lele-ChrLele18 5592431 5596018 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0886 8 508 Receptor kinase-like Gene Family AT2G23950 76.647 0.0 784
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Lele18g0886 Pkinase 5.5e-41 CL0016