Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0884 ATGCCAGATTTAGGAAGCTTATATCTCTCAGAAGCTCTTGATCTGCCTCACTGCCCTAATCTGAATGTCCCTGCCGAACCATCTGATCTTACCAGTTCTCTGTACACAGTCCCAGTTAAAACCCTTGGTAATTGTTACATTTCCAAACACACTCTTCTATTCCCTGTTCTTCAGCAGGACGAGGCCCAGAGTGGAAATGAATTCAGGGTTTCAAAGCGGAGCCGGGGTTCTTTGGATCGGGTCAATAAGGCAGCCAACGACAAGGGTTCAGAGGATCATGTGAAAGATTGGTCTGGGAAGAAGATAGATTCTGGGTTTTGTAGGCTCAGCTGCACTCTTCCATTTCTTGTGGCTGCTCCGAAGATGTTTTGTGGTCGTATAATATCATCTAATGGACAGGCTTGCTTTATTTGCAAACAAAAATTACACTTGCGGTGTGAGCGGTGCACAATGGCATTTCATACTAAATGCGCTCCATGGCCAGATGCTGTAATGCTTTCAAAGGATCATCCTGGACGAGCTGTTTGTTGGAGGCATCCTACTGATTGGCGGTTGGATAGAAAGATTGTCACTTCTGGCTGGCTGACAGGACTGTTGTATTTGTTGGATGAGCAGCATGAAGCTTCAACAAGTAACATAGAGGAAGTGTTTTGCCGTTTGCCACTTCCTTATATCAACGAGGAGTTCAAGATTGATTTCACGTGGAAAGACATGGAGAGTAAGGTTGAACCGCCTCCATATGTACACATAAGACGCACCTTAACGTTGTTATCAGATGTATACCTCGTGAAGAAGAAGCGCAGTGATTCAGATGATGGCGCAGGAGTTCAATGCATAAGCTGCTCTAAGGCTTGTCGCTGCTTAGAAAATTGCAATAATCGACCGTTTCGCAAGGATAAAAAGATCAAGATTGTCAAGACTGAACTTTGTGGCTGGGGAGTAGAGGCCGCTGAAACCATCAAGAAAGGCGAATTTGTAATTGAATATGTTGGAGAAGTAATAGATGATGCTTTATGTGAAAAAAGACTTTGGGACATGAAATACAAAGGTGAACAGAATTTCTATATGTGTGAGATTCGGAAAGACTTCACAATAGATGCAACTTTCAAAGGGAATACATCACGCTTTTTAAACCATAGCTGTGATCCCAACTGTGTTTTGGAGAAGTGGCAAGTTGACGGTGAAACACGCGTGGGTGTCTTTGCCGCACGCTCAATAGAAGTCGGAGAACCGTTAACATACGATTACAGATTTGTGCAATTTGGACCAGGGGAAAAATGCCACTGTGGTGCTTCAAATTGTCAAGGCTTTTTAGGGACCAAAAAGAAGATTGACAAGGTGAACCTTTGCTGGGGCTCAAAACGGAAGAGAACATGTATTACAGTGGGGACCAAAAAGGGAACTTCACCTACTTGCATTGCAATAGTAACAGCTGTATGA 1440 0.4361 MPDLGSLYLSEALDLPHCPNLNVPAEPSDLTSSLYTVPVKTLGNCYISKHTLLFPVLQQDEAQSGNEFRVSKRSRGSLDRVNKAANDKGSEDHVKDWSGKKIDSGFCRLSCTLPFLVAAPKMFCGRIISSNGQACFICKQKLHLRCERCTMAFHTKCAPWPDAVMLSKDHPGRAVCWRHPTDWRLDRKIVTSGWLTGLLYLLDEQHEASTSNIEEVFCRLPLPYINEEFKIDFTWKDMESKVEPPPYVHIRRTLTLLSDVYLVKKKRSDSDDGAGVQCISCSKACRCLENCNNRPFRKDKKIKIVKTELCGWGVEAAETIKKGEFVIEYVGEVIDDALCEKRLWDMKYKGEQNFYMCEIRKDFTIDATFKGNTSRFLNHSCDPNCVLEKWQVDGETRVGVFAARSIEVGEPLTYDYRFVQFGPGEKCHCGASNCQGFLGTKKKIDKVNLCWGSKRKRTCITVGTKKGTSPTCIAIVTAV 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0884 479 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 470 IPR025787 -
Lele18g0884 479 Gene3D SET domain 224 458 IPR046341 -
Lele18g0884 479 PANTHER SET DOMAIN PROTEINS 94 457 - -
Lele18g0884 479 SUPERFAMILY FYVE/PHD zinc finger 129 179 IPR011011 -
Lele18g0884 479 SMART set_7 300 423 IPR001214 GO:0005515
Lele18g0884 479 FunFam Histone-lysine N-methyltransferase 224 450 - -
Lele18g0884 479 ProSiteProfiles Post-SET domain profile. 423 439 IPR003616 -
Lele18g0884 479 CDD SET_ASHR3-like 301 439 - -
Lele18g0884 479 Pfam SET domain 311 416 IPR001214 GO:0005515
Lele18g0884 479 SUPERFAMILY SET domain 233 429 IPR046341 -
Lele18g0884 479 ProSiteProfiles SET domain profile. 300 417 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0884 Lele-ChrLele18 5565515 5570753 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0884 275 438 C2H2 Transcription Factor Family AT2G23740 36.170 1.44e-24 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele18g0884 SET 2.7e-19 No_clan