Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0878 ATGACTAGCCCTTCTTCGGAATCCATGGCAAAACCTAATAAGTTACTTTTTGCTTTTTTGGCTCAGATTTTAGCTATAGTAGCCACCATTTCAGGGAATAATGGGTTTGCTTTGGGAACATCTTCATCGGACCCGTTTGTCCTGCAAAAACTGGACCGGGTTGATAGGTTGCCGGGTCAAACGTTTAACATCGATTTCGCACATTATGCTGGATATGTCACAGTCAACCAGGAATCTGGGAGGGCACTGTTTTACTGGTTCTTTGAAGCTTCTTCAGACCCTGCAACGAAGCCTCTCGTTCTGTGGCTCAATGGAGGACCTGGATGTTCATCCATTGCTTATGGGGAAGCAGAGGAAATTGGTCCCTTTCACATTCAGCCAGATGGCAAGACGCTTTATCTAAATCCTTATTCTTGGAATCAAGTTGCCAACATTCTTTTTCTTGATTCTCCTGTTGGAGTTGGATTTTCGTATTCAAACACTTCATCTGACATATTGAACAATGGCGATAAGAGGACTGCTGAGGACTCTTTGGAATTCCTGTTGAAGTGGTTTGAGCGTTTTCCTCACTATAAAGGAAGAGATTTCTTCATCGCTGGTGAAAGCTATGCAGGGCATTATGTTCCCCAACTTAGCCAAGTTATTGTGAACTACAACAAGAACGCCAAAGAAAAAGTTATCAATATGAAAGGCTACATGGTAGGAAATGCTCTAACTGATGATTACAATGATCACAAGGGAATTGCCCAGTTTTTGTGGTCATCTGGTTTGATTTCTGATCAAACATATCAGCAAATGGATCTTCAATGTGATCAAGAGTCTTTCCTAAATCCTTCATATTCATGTGTACAAATTTTAGAGATTGCTGACAAAGAAGTTGGCCAAATTGATATGTACAGTATCTTCACTCCTGCGTGCACTGCCAATGCTAGCCAGACACACCAGCTGATGAAAAGAAAGCATAAAATTGGCAGACTTAGAGCGGTATACGATCCTTGCACCGAGAAACACTCCGCTGTATACTTCAATCTACCTGAGGTCCAGAAGGCTCTTCATGTTGATCCAGCTCACAAGCCTGCTAAATGGGCGACCTGCAGTGACGAGGTAGGCGAAAACTGGAAGGATTCTCCAATGACAGTGCTCGATATTTATCGCGAACTTATTCCAACAGGACTGAGGATATGGGTGTTCAGTGGCGACACAGATGCTGTGATCCCAGTGACATCCACTCGCTACAGCATAGATGCTCTGAAACTTAAAACTGTGACACCTTGGTGTCCTTGGTATGATGATGGGCAGGTGGGAGGATGGACACAAGAATATGAGGGACTCACTTTTGTTGCAGTAAGGGGGGCAGGGCATGAGGTTCCTCTGCACAGACCTAAATATGCTCTTGCTCTCATCAAATCCTTTCTTGCTGGAACTTCCATGCCTTCCCTTGACCTTAAGCTTCTCAGTGCCTCTTGA 1467 0.439 MTSPSSESMAKPNKLLFAFLAQILAIVATISGNNGFALGTSSSDPFVLQKLDRVDRLPGQTFNIDFAHYAGYVTVNQESGRALFYWFFEASSDPATKPLVLWLNGGPGCSSIAYGEAEEIGPFHIQPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDILNNGDKRTAEDSLEFLLKWFERFPHYKGRDFFIAGESYAGHYVPQLSQVIVNYNKNAKEKVINMKGYMVGNALTDDYNDHKGIAQFLWSSGLISDQTYQQMDLQCDQESFLNPSYSCVQILEIADKEVGQIDMYSIFTPACTANASQTHQLMKRKHKIGRLRAVYDPCTEKHSAVYFNLPEVQKALHVDPAHKPAKWATCSDEVGENWKDSPMTVLDIYRELIPTGLRIWVFSGDTDAVIPVTSTRYSIDALKLKTVTPWCPWYDDGQVGGWTQEYEGLTFVAVRGAGHEVPLHRPKYALALIKSFLAGTSMPSLDLKLLSAS 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0878 488 Gene3D alpha/beta hydrolase 49 308 IPR029058 -
Lele18g0878 488 ProSitePatterns Serine carboxypeptidases, serine active site. 198 205 IPR018202 GO:0004185
Lele18g0878 488 Gene3D - 333 369 - -
Lele18g0878 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 444 457 IPR001563 GO:0004185|GO:0006508
Lele18g0878 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 184 209 IPR001563 GO:0004185|GO:0006508
Lele18g0878 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 135 147 IPR001563 GO:0004185|GO:0006508
Lele18g0878 488 PRINTS Carboxypeptidase C serine protease (S10) family signature 148 158 IPR001563 GO:0004185|GO:0006508
Lele18g0878 488 FunFam Carboxypeptidase 48 308 - -
Lele18g0878 488 FunFam Carboxypeptidase 380 474 - -
Lele18g0878 488 SUPERFAMILY alpha/beta-Hydrolases 54 477 IPR029058 -
Lele18g0878 488 Gene3D - 380 474 - -
Lele18g0878 488 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 53 461 IPR001563 GO:0004185|GO:0006508
Lele18g0878 488 FunFam Carboxypeptidase 330 477 - -
Lele18g0878 488 ProSitePatterns Serine carboxypeptidases, histidine active site. 444 461 IPR033124 GO:0004185
Lele18g0878 488 Pfam Serine carboxypeptidase 58 473 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0878 Lele-ChrLele18 5516139 5520288 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0878 343 477 Calmodulin-binding Proteins AT2G22960 22.794 2.76e-09 55.1