Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0868 ATGGCCGCGAAAGAAGGGAAGGCAATAGGCATAGACCTTGGAACGACCTACAGCTGCGTGGGAGTATGGCAAAACGACCGTGTTGAGATCATCCCGAATGATCAAGGCAATCGGACCACCCCATCCTACGTGGCATTCACCGACACCGAGAGGCTCATCGGAGATGCGGCGAAGAATCAGGTGGCTATGAACCCACAAAACACCGTGTTTGATGCGAAGCGTCTGATCGGCCGGCGGTTTTCCGACCCCTCCGTTCAAAACGACATGAAGCTTTGGCCTTTCAAAGTCGTTCCTGGAGCAGCAGAGAAGCCCATGATCATCGTCACATACAAAGGCGAAGAGAAGAAGTTCGCTGCCGAAGAGATCTCGTCAATGGTTCTGATAAAAATGCGTGAAGTAGCCGAGGCGTTTTTGGGTCATCCGGAAGAGATTGAGAAGATGGTGCAAGATGCAGAGAAGTACAGAGCAGAGGACGAGGAAGTGAAGAAGAAGGTTGAAGCCAAGAATTCACTTGAGAACTATGCTTATAACATGAGGAACACAATCAAGGACGAGAAGATTGCGAGCAAGTTAGGAGCAGATGAGAAGCAGAAGATTGAGAAGGCTGTGGAAGAGACGATAGAGTGGTTGGACGGAAATCAATTGGCTGAAGTTGATGAATTTGAGGATAAGCTGAAGGAATTGGAGGGTATATGCAATCCCATTATAGCTAAGATGTACCAGCAGGGTGGTGGTGCCGGTGCTGGTGCTGCTGGTGGTGAAATGGGTGAGAACATGCCGGATTCTGGATCCGGAGGGTCGGGTTCTGGAGCTGGACCCAAGATTGAAGAAGTTGACTGA 840 0.5 MAAKEGKAIGIDLGTTYSCVGVWQNDRVEIIPNDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPQNTVFDAKRLIGRRFSDPSVQNDMKLWPFKVVPGAAEKPMIIVTYKGEEKKFAAEEISSMVLIKMREVAEAFLGHPEEIEKMVQDAEKYRAEDEEVKKKVEAKNSLENYAYNMRNTIKDEKIASKLGADEKQKIEKAVEETIEWLDGNQLAEVDEFEDKLKELEGICNPIIAKMYQQGGGAGAGAAGGEMGENMPDSGSGGSGSGAGPKIEEVD 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0868 279 ProSitePatterns Heat shock hsp70 proteins family signature 1. 11 18 IPR018181 -
Lele18g0868 279 FunFam Heat shock 70 kDa protein 70 125 - -
Lele18g0868 279 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 166 247 IPR029048 -
Lele18g0868 279 FunFam heat shock cognate 70 kDa protein-like 168 242 - -
Lele18g0868 279 PRINTS 70kDa heat shock protein signature 7 20 - -
Lele18g0868 279 PRINTS 70kDa heat shock protein signature 57 65 - -
Lele18g0868 279 PRINTS 70kDa heat shock protein signature 35 47 - -
Lele18g0868 279 Gene3D - 3 151 - -
Lele18g0868 279 MobiDBLite consensus disorder prediction 243 279 - -
Lele18g0868 279 Gene3D - 162 279 IPR029048 -
Lele18g0868 279 Gene3D - 70 121 - -
Lele18g0868 279 Pfam Hsp70 protein 8 140 IPR013126 GO:0005524|GO:0140662
Lele18g0868 279 Pfam Hsp70 protein 141 241 IPR013126 GO:0005524|GO:0140662
Lele18g0868 279 SUPERFAMILY Actin-like ATPase domain 7 141 IPR043129 -
Lele18g0868 279 PANTHER HEAT SHOCK PROTEIN 70KDA 142 206 IPR013126 GO:0005524|GO:0140662
Lele18g0868 279 Coils Coil 144 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0868 Lele-ChrLele18 5447773 5449740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0868 142 241 Calmodulin-binding Proteins AT1G56410 64.000 6.75e-34 127