Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0867 ATGCAGCAAGGTGATCAGACGGTGATTAGCTTGAGGCCTGGTGGTGGTCGTCCCGGCGGCGGTAGCAGGTTCCTTGCTCCTCGACTCGACTCATCCTCATCGGCTTCCTGTACTCCTGCTTTTGGTTCCTTTGCCTCTGATCCTTCTCGTCCCCATGGCGGTGCTCTTCCTTCTTTTTCTATAAAGGCTGGAGAGTCACGGTTTGAGAGTCGTGAGCGATACACTAGGGATCAACTTTTACAACTGAGGGAGGTTGTTGAGATTCCTGAAGATATTTTAAAAATTAAACGAGATATAGAAACTGAACTTTTTGGCGAAGATCAAAGCTGGGGCCGTGCAGAAAATTCTGCACAACAATTTCAAAATCGACACTCTGAGCCAGACAACCGTGATTGGCATGGCCGGTCTGGGCAACTTCCTACTTCTGCAGAAGAGAAGTCATGGGAGAATCTGAGGGAGAATAGAGAGTTTGGAAATTGGTTTGACTCAAGGCAGCAGGACCGGCAGGATCAACTGAATTCCCAGTTTGCAAGGGCAAATATTTCTTCTAATCAAGGAGGACCTGCTCCAACTTTAGTCAAGGCTGAGGTTCCATGGTCAGCTAGAAGAGGAAACCTATCTGAAAAGGATCGTGTCTTGAAAACCGTTAAAGGAATTCTAAACAAGCTTACCCCTGAGAAATTTGATGTCCTGAAGGGTCAATTGATTGATTCTGGAATTACATCTGCTGACATCTTGAAGGAAGTCATTTCACTGATATTTGATACGGCTGTACTAGAACCAACATTTTGCCCCATGTATGCCCTTCTTTGTTCAGATCTTAATGAAAAGCTGCCTCCTTTCCCGTCTGATGAGCCTGGTGGGAAAGAAATCACTTTTAAGCGAGTACTCTTGAATAACTGTCAGGAGGCTTTTGAAGGCGCTGGTAAACTGAGGGAGGAAGTGAGGCAGATGACTGCTCCTGAGCAGGAGATGGAGCGTAGGGATGAGGAAAGACTGGTCAAGCTTCGTACTCTTGGAAACATCCGACTAATTGGGGAGCTGTTGAAGCAGAAGATGGTTACTGAAAAGATTGTCCATCACATTGTTCAGGAACTTTTGGGACCTCCTGATAGCAAGTCCTGTCCAGTTGAGGAAAATGTTGAAGCCATATGTCAGTTTTTCAATACTATTGGTAAACAACTTGACGAAAGCCAAAAATCACGACGTATTAATGACATGTACTTTAGCCGATTGAAAGAACTGAGCTCAAACCCCAAACTTGTATCACGGTTGAGGTTCATGATTCGTGATGTTCTAGATTTACGTGCTAATAACTGGGTTCCAAGACGTGAAGAGGTAAAAGCAAAAACCATCACTGAAATTCATTCAGAAGCTGAAAAGAATCTTGGATTGCGGCCAGGCGCTACTGCAAGCATTAGAAATAACCGTGCTGGAGGTTCTGGTCCTCAAGGAAATATCAGCCCTGGTGGATTTCCAATTGCTCGACCTGGTACAGGAGGCATGATGCCTGGAATGCCAGGAACCAGGAAGATGCCTGGGATGTCTGGAATTGATAATGACAACTGGGAAATGCCTAGGAGATCAATGCCAAGAGGAGACATGTCGGGTATGCAAGCTGCAGGACGTGGCCAGTCTTCTTTACTTGCGAAGCCATCAGCCCTGAACTCAAAGCTATTACCTCAAGGTAGTGGTGGTGTCATAAGTGGAAGAAGCAGTGCCCTAGTGCATGGTGGTGGCGCTCCTCCTTCTCGTCCATCAAACTTTGTTTCTGCTGCTGAGCCTGCATCTCAAATCCCTACATCTACGAAAGCTGTCCCTCCTAGTGGGTTTGTTAAGCCACAAGCTCCAGCTCCAAAATTAAATTTGGATGATCTTCGCAACAAAACTGTCTTTCTTCTGGAAGAATATTTCAGTGTTCGTCTTCTAGACGAGGCATTGCGGTGTGTGGAAGAACTAAAGGCTCCATCCTACCACCCTGAGTTTGTTAAGGAGGCTATTTCCCTCGCACTAGATAAAAGTCCACCCTGTGTTGATATCGTCGGCAATCTTCTTGAGTATCTTTTTATTAAGAAGATTCTTACTGCTAGAGATATAGGGACTGGCTGTTTCTTGTTTGGTTCCATGCTAGACGACATGGGCATAGATTTACCTAAAGCACCAAATAACTTTGGTGAGATAATTGGGAAGCTAATTTTGGCTGGGGGATTGGATTTTAAGGTAGTGACAGAGATCCTTAAGAAGGTGGAAGATGAGTATTTCCAGAAAGCAATATTTGATGCTGCAATAAGGATCATTAGTTCTGCATCTGGGCAAGCTCTTCTAGATTCACAAGCTGCTGATATCGAGGCTTGCCACAGCGTGCTCAAGTGA 2373 0.4522 MQQGDQTVISLRPGGGRPGGGSRFLAPRLDSSSSASCTPAFGSFASDPSRPHGGALPSFSIKAGESRFESRERYTRDQLLQLREVVEIPEDILKIKRDIETELFGEDQSWGRAENSAQQFQNRHSEPDNRDWHGRSGQLPTSAEEKSWENLRENREFGNWFDSRQQDRQDQLNSQFARANISSNQGGPAPTLVKAEVPWSARRGNLSEKDRVLKTVKGILNKLTPEKFDVLKGQLIDSGITSADILKEVISLIFDTAVLEPTFCPMYALLCSDLNEKLPPFPSDEPGGKEITFKRVLLNNCQEAFEGAGKLREEVRQMTAPEQEMERRDEERLVKLRTLGNIRLIGELLKQKMVTEKIVHHIVQELLGPPDSKSCPVEENVEAICQFFNTIGKQLDESQKSRRINDMYFSRLKELSSNPKLVSRLRFMIRDVLDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGATASIRNNRAGGSGPQGNISPGGFPIARPGTGGMMPGMPGTRKMPGMSGIDNDNWEMPRRSMPRGDMSGMQAAGRGQSSLLAKPSALNSKLLPQGSGGVISGRSSALVHGGGAPPSRPSNFVSAAEPASQIPTSTKAVPPSGFVKPQAPAPKLNLDDLRNKTVFLLEEYFSVRLLDEALRCVEELKAPSYHPEFVKEAISLALDKSPPCVDIVGNLLEYLFIKKILTARDIGTGCFLFGSMLDDMGIDLPKAPNNFGEIIGKLILAGGLDFKVVTEILKKVEDEYFQKAIFDAAIRIISSASGQALLDSQAADIEACHSVLK 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0867 790 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 58 784 IPR045208 GO:0003743
Lele18g0867 790 ProSiteProfiles MI domain profile. 625 747 IPR003891 -
Lele18g0867 790 SUPERFAMILY ARM repeat 619 769 IPR016024 -
Lele18g0867 790 SMART if4_15 213 439 IPR003890 GO:0003723|GO:0005515
Lele18g0867 790 MobiDBLite consensus disorder prediction 27 43 - -
Lele18g0867 790 MobiDBLite consensus disorder prediction 466 490 - -
Lele18g0867 790 Gene3D - 618 784 - -
Lele18g0867 790 MobiDBLite consensus disorder prediction 1 59 - -
Lele18g0867 790 FunFam Eukaryotic translation initiation factor isoform 4G-2 204 440 - -
Lele18g0867 790 FunFam Eukaryotic translation initiation factor isoform 4G-2 619 780 - -
Lele18g0867 790 SUPERFAMILY ARM repeat 206 442 IPR016024 -
Lele18g0867 790 Pfam MIF4G domain 213 439 IPR003890 GO:0003723|GO:0005515
Lele18g0867 790 SMART ma3_7 626 738 IPR003891 -
Lele18g0867 790 Pfam MA3 domain 626 738 IPR003891 -
Lele18g0867 790 MobiDBLite consensus disorder prediction 109 147 - -
Lele18g0867 790 Gene3D - 204 440 - -
Lele18g0867 790 MobiDBLite consensus disorder prediction 572 591 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0867 Lele-ChrLele18 5438726 5444178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0867 1 788 Eukaryotic Initiation Factors Gene Family AT5G57870 63.693 0.0 950