Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0858 ATGCTCGATTTTGGTTACCAGAGGGAAAACTTCGTCAGGTTGGATGACTTGGACTCTACACTATCTTCATCTTCTGATGCTGGACATAATAAATGTGGATTTGGTACGGTTAAATTAAGCAGTGGTGGTTATGCACGCATTGGAAGCCCCGGATCTTTTAAAAGAGGAATGAGAAAGGGATCTAAAGGGCTGAAGTCGATTGGCCGATCGCTTGGATTTGGAGTATCCAGAGCAGTCTTCCCGGAAGACCTTAAAGTGTCAGAGAAGAAGATATTTGATCCTCAAGACAAATTCTTACTTTTGTGGAATAAGCTTTTTGTAATCTCATGCATTTTGGCTGTCTCTATTGATCCATTGTTTTTTTATCTCCCTGTGATCCAATTGTGGTTTGGAGATTTCTTCAGAGGTCAAAAAATTCAGATGTATTGGCCAACAAAGGAGGCCTTACTGTTCATCATCTTGCTTCAATATGTTCCTAGATTGCTTCGGATGGTACCGTTGACTTCAGAACTTAAGAGAACAGCCTGTGTCTTCGCGGAAACTGCATGGGCCGTAGCTGCATTTTATTTGCTATTATACATGCTAGCTAGTCATCACATGGAAGGTTATAGTGCCTGGCAGAATAGAAACAGAGATATTTTTAATTCGGAGTGTTCTGTGGATACTGAAAATCCACATTTTGATTATGTAATTTTTACCCAAGCATTTTCATCTGGGATTGTTTCATCTAAAACTACACTTGGCCAAGGGCTTCAAACCAGCACCTACGGTGGGGAGGTTATATTTTCGATTGCGCTAGCCATTTCCGGGCTTATCCTCTTTGAGCTCCTGATTGGTAACAAGCAGACGTACCTTCAGTCTCTTACCATTAGGCTTGAGGAAATGAGAGTCAAAAGGCGTGATTCGGAACAGTGGATGCATCATCGCTTGCTCCCCTATGAGTGTAGGGAAAGTGTTAGACGCTATGATCAATATAAGTGGTTGGCAACACGTGGCGTAGATGAAGAAAGTTTGGTGCAGAGTCTACCGAAGGATCTTCAAAGAGATATTAAGCGTCATCTTTGTCTGGTTTTAGTCAGAAGGGTTCCACTATTTGAGAGTATGGATGAGAGATTACTTGATGCACTTTGTGAGAGACTGAAACCATGTTTATTTACAGAGAATACTTACATTGTTCGTGAAGGAGATCCGGTTGATGAGATGCTTTTCATCATCCGTGGTTCAACGTACCTTCGGTTTTACTCACAACAATGGAGAACTTGGGCTGCTTGCTTTATTCAAGCAGCGTGGCGTCGTTATTGCAAGAGGAAGATTATGGAGCTTCGTCGAAAAGGAGAAGAATCCGAGGAATCAGAAGGAGGAGCTCGCAACAATGCTGGTGGTGGTGGTGGTGGTCCATACAGCATTGGTGCCACCTTCTTAGCCTCAAGATTTGCAGCCAATGCTCTTCGAGGTATACATCGCAATGGGAATGCTAAGACTGCTAGGGAATTGGTGAAACTACAGAAGCCGCCAGAGCCTAACTTCACTGCGATGAATGATGATGCAGACTAA 1554 0.4299 MLDFGYQRENFVRLDDLDSTLSSSSDAGHNKCGFGTVKLSSGGYARIGSPGSFKRGMRKGSKGLKSIGRSLGFGVSRAVFPEDLKVSEKKIFDPQDKFLLLWNKLFVISCILAVSIDPLFFYLPVIQLWFGDFFRGQKIQMYWPTKEALLFIILLQYVPRLLRMVPLTSELKRTACVFAETAWAVAAFYLLLYMLASHHMEGYSAWQNRNRDIFNSECSVDTENPHFDYVIFTQAFSSGIVSSKTTLGQGLQTSTYGGEVIFSIALAISGLILFELLIGNKQTYLQSLTIRLEEMRVKRRDSEQWMHHRLLPYECRESVRRYDQYKWLATRGVDEESLVQSLPKDLQRDIKRHLCLVLVRRVPLFESMDERLLDALCERLKPCLFTENTYIVREGDPVDEMLFIIRGSTYLRFYSQQWRTWAACFIQAAWRRYCKRKIMELRRKGEESEESEGGARNNAGGGGGGPYSIGATFLASRFAANALRGIHRNGNAKTARELVKLQKPPEPNFTAMNDDAD 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0858 517 MobiDBLite consensus disorder prediction 497 517 - -
Lele18g0858 517 FunFam Cyclic nucleotide-gated ion channel 1 291 355 - -
Lele18g0858 517 Gene3D Jelly Rolls 362 442 IPR014710 -
Lele18g0858 517 ProSiteProfiles cAMP/cGMP binding motif profile. 364 408 IPR000595 -
Lele18g0858 517 Gene3D Helix hairpin bin 292 355 - -
Lele18g0858 517 CDD CAP_ED 364 408 IPR000595 -
Lele18g0858 517 SUPERFAMILY cAMP-binding domain-like 293 410 IPR018490 -
Lele18g0858 517 ProSiteProfiles IQ motif profile. 419 448 IPR000048 GO:0005515
Lele18g0858 517 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 123 199 - -
Lele18g0858 517 SUPERFAMILY Voltage-gated potassium channels 158 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0858 Lele-ChrLele18 5392654 5395939 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0858 411 511 Ion Channels AT4G30560 58.824 4.47e-26 110