Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0849 ATGGGTTTTGGGGCATTTGGTTCCATTGTAGTTCTGACGATTTTCTTTGAGCATTTGGCTTGTCAGCAACCAAATACTGATGATTTCTTTGTGTATGAGTTCTTGAAGAACATGGGTTTATCGTCATCATCTTCTTCCTCAAAAGCCTTCAACTTCTCTGCTTCTGTTTGTTCATGGCCTGGTGTTTCCTGTGATGCAAATAAAGAACATGTTATTGAGTTGAAAGCTTCTGGTTTGGAACTCTCTGGACCTATTCCTGATAACACCATTAGCAAACTCAGCAAGCTACAAATTTTGGATCTTAGTAACAACAAAATCACTGCTTTGCCTTCTGATTTCTGGAGCTTAGGCTCTTTGAAGATTCTTAACCTCTCCTCCAATCAGATATCAGGTTCACTTGCCAGCAACTTTGGCAACTTTGGTCACCTCGAAACCTTTGACATGTCGAACAACCATTTTTCTGGGGAAATTCCTGAAGCTATTAGCTCTCTTGTGAGTTTAAGGATCCTTAAACTTGACAAAAACAAGTTTGAGCAAAACATACCTTCTGGGATTCTACAGTGTCAGTCTCTAGTTTCTATTGATCTTTCACTAAATCAGCTTAATGGAACTTTTCCTGAAGGTTTTGGAGCTGCTTTTCCTAAACTTGAAATCTTGAACCTTGCAGGGAATAATCTTCATGGACATGACTCAGATTTTTCAGGGTTGAAATCCATTACTAGTATTAACATATCTGCAAATTCCTTTCAGGGTTCTTTTCTGGGTATGTTTCAGGAACAGTTGGAGGTAATTGACCTTAGCAGGAACCAGTTTGAGAGTAAGATTTCTCAGGTAAAGTTCAAGTACAATTGGTCTCATTTGGTTTATCTGGATTTGTCTGAGAATAGGCTTAGTGGGGAAATTTTCCAGTATCTTAATGAATCCCAGAATCTTAAACACCTTAATCTGGCACACAATAAGTTTGCAAGTCAGAAATTTCCCCAAATTGAAAACCTCTCAAAGTTGGAATATCTGAACTTGTCCGAAGCTAATCTGCATGGCCACATTCCTGCAGAAATATCACAGCTGAGTAATTTGAATTCACTTGATCTTTCTTTGAATAATCTTGTTGGGGGAATTCCATTTCTAAGAAGTGAAAACCTCCAAGTTCTTGACCTTTCATACAACAATTTGAGTGGTGAAATCCCTCAACCTGTGTTGGAGAAGCTCCCATCAATGGAGAAATATAACTTCTCTTATAATAACTTAACCTTCTGTTCTTTGGGAATCAACCCCAATATCCTCAAAACAGCATTCTATGGCTCATCAGACAATTGCCCGATTGCAGCGAATCCAAAGCTTTTCAAAAGAACCGATGAACAACGAAAGGGTATGAAGCTAGCTCTGGCATTGACCCTCTCAATGGTCAGCTTACTTTCTGGCCTTTTATTTCTAGCATTTGGTTGCAGAAGGAAAACAAAATCATGGGCAATTAAGCAAACTTCCTACAAAGAAGAGCAGAACATTTCGGGTCCCTTCTCGTTCCAGACTGATTCAACTACCTGGGTGGCTGATGTCAAGCAAGCAAACTCAGTCCCAGTAGTAATCTTTGAGAAGCCATTACTCAACATTACATTTGCAGATCTCTTGTACTCAACTTCGAATTTCGATAGGGGTACCCTCTTGGCTGAAGGCAAATTCGGGCCTGTTTACCGAGGTTTTCTGCCCAGTGGCATTCATGTTGCAGTTAAAGTTTTGGTTGTTGGGTCTACATTGACAGAACAAGAAGCTGCTAAAGAGCTTGAGTATCTTGGTCGAATCATGCACCCTAATCTTGTTCCTCTGAGTGGATATTGCTTTGCTGGGGATCAAAGGATTGCCATATATGATTACATGGAGAATGGGAACTTGCAAAACCTTCTTCATGACTTGCCACTTGGTGTGCAGAAGACAGATCATTGGATCACAGACACAAGGGAAGAAGGAGATGACATGAATAATGGAATTCACAATGCTAGCTATGAAGGATTATCACTCTCATCTTGGCGATTTCGACACAAAATCGCCCTTGGCACTGCTCGAGCATTGGCATTTCTTCACCATGGCTGCTCGCCTCCAATCATTCACAGAGATGTTAAAGCTAGCAGTGTCTACTTGGACTATAACTTGGAGCCAAGGTTATCAGATTTTGGGCTGGCCAAGATTTTTGGAAGCAGCTTGGATGAGGAGGTTGCTCGAAGCTCTCCTGGCTATGTTCCGCCCGAGTTTTCTCAACCCGAATATGACCTCCCAACACCGAAATCCGATGTTTACTGTTTTGGGGTTGTTCTCTTTGAGCTAATAACAGGGAAAAAACCAGTTGGGGATGATTATCCTGAAGAGAAAGAAGGGAACTTGGTAAGCTGGGTCAGAGGACTGGTAAGAAAGAACTTAGCTTCAAGAGCTATTGATCCAAAAATTAGTGATAGAGGAATTGATGATCAAATTGAAGAAGCCCTTAAGATTGGTTATCTTTGTACTGCTGATCTTCCCTCTAAGAGACCTAGCATGCAGCAGATAGTGGGACTTTTGAAAGATATTGAGCCTGCTGCTGGGGAAAAATCATAA 2586 0.4091 MGFGAFGSIVVLTIFFEHLACQQPNTDDFFVYEFLKNMGLSSSSSSSKAFNFSASVCSWPGVSCDANKEHVIELKASGLELSGPIPDNTISKLSKLQILDLSNNKITALPSDFWSLGSLKILNLSSNQISGSLASNFGNFGHLETFDMSNNHFSGEIPEAISSLVSLRILKLDKNKFEQNIPSGILQCQSLVSIDLSLNQLNGTFPEGFGAAFPKLEILNLAGNNLHGHDSDFSGLKSITSINISANSFQGSFLGMFQEQLEVIDLSRNQFESKISQVKFKYNWSHLVYLDLSENRLSGEIFQYLNESQNLKHLNLAHNKFASQKFPQIENLSKLEYLNLSEANLHGHIPAEISQLSNLNSLDLSLNNLVGGIPFLRSENLQVLDLSYNNLSGEIPQPVLEKLPSMEKYNFSYNNLTFCSLGINPNILKTAFYGSSDNCPIAANPKLFKRTDEQRKGMKLALALTLSMVSLLSGLLFLAFGCRRKTKSWAIKQTSYKEEQNISGPFSFQTDSTTWVADVKQANSVPVVIFEKPLLNITFADLLYSTSNFDRGTLLAEGKFGPVYRGFLPSGIHVAVKVLVVGSTLTEQEAAKELEYLGRIMHPNLVPLSGYCFAGDQRIAIYDYMENGNLQNLLHDLPLGVQKTDHWITDTREEGDDMNNGIHNASYEGLSLSSWRFRHKIALGTARALAFLHHGCSPPIIHRDVKASSVYLDYNLEPRLSDFGLAKIFGSSLDEEVARSSPGYVPPEFSQPEYDLPTPKSDVYCFGVVLFELITGKKPVGDDYPEEKEGNLVSWVRGLVRKNLASRAIDPKISDRGIDDQIEEALKIGYLCTADLPSKRPSMQQIVGLLKDIEPAAGEKS 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0849 861 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 110 205 - -
Lele18g0849 861 Gene3D Ribonuclease Inhibitor 378 426 IPR032675 -
Lele18g0849 861 SMART serkin_6 549 857 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0849 861 SMART LRR_sd22_2 308 334 - -
Lele18g0849 861 SMART LRR_sd22_2 284 307 - -
Lele18g0849 861 SMART LRR_sd22_2 93 126 - -
Lele18g0849 861 SMART LRR_sd22_2 356 383 - -
Lele18g0849 861 ProSiteProfiles Leucine-rich repeat profile. 95 116 IPR001611 GO:0005515
Lele18g0849 861 Pfam Protein tyrosine and serine/threonine kinase 553 848 IPR001245 GO:0004672|GO:0006468
Lele18g0849 861 ProSiteProfiles Leucine-rich repeat profile. 380 404 IPR001611 GO:0005515
Lele18g0849 861 Gene3D Phosphorylase Kinase; domain 1 509 624 - -
Lele18g0849 861 Gene3D Ribonuclease Inhibitor 185 280 IPR032675 -
Lele18g0849 861 Gene3D Ribonuclease Inhibitor 281 377 IPR032675 -
Lele18g0849 861 Gene3D Ribonuclease Inhibitor 31 184 IPR032675 -
Lele18g0849 861 Pfam Leucine Rich repeat 379 394 IPR001611 GO:0005515
Lele18g0849 861 Pfam Leucine Rich repeat 308 321 IPR001611 GO:0005515
Lele18g0849 861 SUPERFAMILY Protein kinase-like (PK-like) 525 850 IPR011009 -
Lele18g0849 861 FunFam Putative LRR receptor-like serine/threonine-protein kinase 510 624 - -
Lele18g0849 861 FunFam Calmodulin-binding receptor kinase CaMRLK 259 375 - -
Lele18g0849 861 ProSiteProfiles Protein kinase domain profile. 549 857 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0849 861 Gene3D Transferase(Phosphotransferase) domain 1 625 860 - -
Lele18g0849 861 PRINTS Leucine-rich repeat signature 96 109 - -
Lele18g0849 861 PRINTS Leucine-rich repeat signature 356 369 - -
Lele18g0849 861 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 260 418 - -
Lele18g0849 861 SUPERFAMILY L domain-like 36 425 - -
Lele18g0849 861 Pfam Leucine rich repeat 190 248 IPR001611 GO:0005515
Lele18g0849 861 Pfam Leucine rich repeat 85 129 IPR001611 GO:0005515
Lele18g0849 861 SMART LRR_typ_2 164 188 IPR003591 -
Lele18g0849 861 SMART LRR_typ_2 93 115 IPR003591 -
Lele18g0849 861 SMART LRR_typ_2 213 235 IPR003591 -
Lele18g0849 861 SMART LRR_typ_2 116 139 IPR003591 -
Lele18g0849 861 SMART LRR_typ_2 332 356 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0849 Lele-ChrLele18 5341503 5344088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0849 73 853 Receptor kinase-like Gene Family AT5G07280 32.371 8.50e-111 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Lele18g0849 PK_Tyr_Ser-Thr 8e-31 CL0016