Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0820 ATGTTGAGGGCCGCCGGCTTCCACAATTTCTTCTCTGGGCAACTTCCTGTGGAAATTTTCAACCTCACCTGTTTAAGAAGCTTGGATATAAGCAGAAACAACTTTTCTGGTCACTTCACAGGTGGGATTTCCAGCCTTAAAAACTTGCTTGTACTTGATGCCTTTAGCAACAGCTTTTCTGGGTCATTGCCTGCAGAACTTTCTGAACTTGAAAATCTCAAGGTCCTTAATCTTGCTGGGAGTTACTTCAAAGGACCAATCCCATCTGAATATGGTTCCTTTAGAAGCCTTGAGTTTCTTCATCTTGCAGGAAATCTTCTCTCTGGGAATCTACCTCCAGAACTTGGTAATCTCAAAACAGTAACCCACATGGAAATTGGCTACAATTCTTACCAGGGTTTCATTCCATCTGAGTTAGTCCCTTTATCTGTGTTCAGAAACCAGCTCACAGGATCAATTCCGAGTGAGTTTAGTAAGATCAAGTCACTCGCAGATTTAGATCTTTCTGATAATCTCATTTCTGGGCCAATTCCTGAAAGCTTCTCAGAGTTGGAGAACCTGAGGCTGCTCAGTCTCATGTACAATGACATGAATGGCACTGTTCCTGAAGGAATTGCAGAACTTTCAAAGTTAGAAACTCTTCTTATTTGGAACAATTGCTTCTCTGGGTCACTTCCACAGAGCTTGGGTAAGAACTCAAATCTCATGTGGGTGGATGTTTCCACAAACAATTTTGCAGGCAGTATACCTCCAGACATTTGTTTGAGAGGAGTACTACATAAGCTGATTCTGTTTTCAAACAGATTCTTAGGCAGCCTCTCACCATCTCTCTCAAATTGTTCTTCACTTGTTCGTCTTCGCTTGGAAGATAACTTGTTCACAGGGAATATCCCTTTGAAATTTAGACATCTTCCAGATATATCATATGTTGACCTATCCAGGAATAAATTTCTTGGTGGGATCCCCTCAGATATTTCCCAAGCTAACAAGCTTACTTATTTCAATGTCTCCAGTAATCCACTATTAGGAGGCACCATCCCTGCACAAACATGGTCTTTGCCACTTCTGCAAAATTTTTCAGCCTCTTCCTGTGGTATTTCAGGGAAACTTCCCCTATTTGAGTCCTGCAGATCAGTCTCTAGCATTGAGCTTGACAGTAACAACTTGTTTGGAACAATCTCATATACTGTTTCAAATTGCAAAAATCTTGAGACCATAAAATTATCCAACAATAATTTATCTGGTCCTATACCTGAGCAGCTTGCAAGCATCCATGTTCTTGGTGTTGTTGACCTATCACACAATAACCTCAGTGGCCTTATACCTGCAAAGTTTAGCTCTTCTTCAAGCTTACAAATGCTTAATGTGTCTTTCAACTACATCTCTGGTTCAATTCCCAAAGGAAACTTATTCAGATTCATGGATAACAGTGCATTTGTTGGGAATCCAGAGCTATGTGGAGCACCTCTTCGACCATGTTCTGATTCAGTTGGAATATTGGGAAGTAAAGGCACATGGAAGCTTACAAGTGTAGTGCTATTGTGTGCAGGATTGCTTATATTCCTTGTTGCAGCATTATCTTTTGGAATAGTTTATTTCAGGAGAGGATTTAAAAGCCAATGGAAGATGATCTCATTTGTTGGGCTTCCTCAGTTTACAGCAAATGATGTTTTGACAAGTTTCAATACCACAGAATCAAGATCACCATCAGTTTCAAAAGCTGTTCTGCCAACTGGAATAACAGTTTTGGTGAAGACGATTGAGTGGGAAAAGAGGAACATTAAAGTGAATCTAGCTTATATTTTATATGACTACTTACCCAATGGGAACTTGGCAGAGAAAATTGGGACGAAAAGGGATTGGGCAGCTAAATTCAGAATTGTGATGGGCATTGCCAAGGGACTTTGCTTCCTTCACCATGACTGTTACCCAGCCATACCCCATGGAGACTTGAAGTCTGGCAATGTAGTATTTGATGAAAATATGGAACCCCACTTGGCAGAATTTGGCCTCAAGCATGTTTTGAAGTTGAGCAAAGGTTCATCTCCTACCACAACTTCTAGCTGGGAACAACCTGACTACAATGAAGCCATGAAAGAGGAATTCTACAGTGATGTCTACAAATTTGGAGAGATGATTCTGGAGATTTTAACTAATGGAAGGCTGGCAAATGCAGCAGCTACCATACACAGAAAACCAAGAGATGTTCATTTGAGAGAAATTTACGATGAAAATGATGATGTAGTTTCTGCAAGTTCACTACAAGAGATCAAACTGGTTCTTGAAGTGGGCTTTGCTTTGCACCAGAAGCAAGTCATCGGATCACCCATCCATGGAAGATGCCTTGAAGCTTTTGTCAGGGTCAAAGCCTCCAGAAGATTACAAATATTAAGATACAGATATTAA 2406 0.4052 MLRAAGFHNFFSGQLPVEIFNLTCLRSLDISRNNFSGHFTGGISSLKNLLVLDAFSNSFSGSLPAELSELENLKVLNLAGSYFKGPIPSEYGSFRSLEFLHLAGNLLSGNLPPELGNLKTVTHMEIGYNSYQGFIPSELVPLSVFRNQLTGSIPSEFSKIKSLADLDLSDNLISGPIPESFSELENLRLLSLMYNDMNGTVPEGIAELSKLETLLIWNNCFSGSLPQSLGKNSNLMWVDVSTNNFAGSIPPDICLRGVLHKLILFSNRFLGSLSPSLSNCSSLVRLRLEDNLFTGNIPLKFRHLPDISYVDLSRNKFLGGIPSDISQANKLTYFNVSSNPLLGGTIPAQTWSLPLLQNFSASSCGISGKLPLFESCRSVSSIELDSNNLFGTISYTVSNCKNLETIKLSNNNLSGPIPEQLASIHVLGVVDLSHNNLSGLIPAKFSSSSSLQMLNVSFNYISGSIPKGNLFRFMDNSAFVGNPELCGAPLRPCSDSVGILGSKGTWKLTSVVLLCAGLLIFLVAALSFGIVYFRRGFKSQWKMISFVGLPQFTANDVLTSFNTTESRSPSVSKAVLPTGITVLVKTIEWEKRNIKVNLAYILYDYLPNGNLAEKIGTKRDWAAKFRIVMGIAKGLCFLHHDCYPAIPHGDLKSGNVVFDENMEPHLAEFGLKHVLKLSKGSSPTTTSSWEQPDYNEAMKEEFYSDVYKFGEMILEILTNGRLANAAATIHRKPRDVHLREIYDENDDVVSASSLQEIKLVLEVGFALHQKQVIGSPIHGRCLEAFVRVKASRRLQILRYRY 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0820 801 ProSiteProfiles Protein kinase domain profile. 517 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele18g0820 801 Gene3D Transferase(Phosphotransferase) domain 1 572 761 - -
Lele18g0820 801 FunFam Leucine-rich repeat receptor-like protein kinase TDR 606 776 - -
Lele18g0820 801 Gene3D Ribonuclease Inhibitor 2 141 IPR032675 -
Lele18g0820 801 Gene3D Ribonuclease Inhibitor 142 256 IPR032675 -
Lele18g0820 801 Gene3D Ribonuclease Inhibitor 257 497 IPR032675 -
Lele18g0820 801 Pfam Leucine rich repeat 141 196 IPR001611 GO:0005515
Lele18g0820 801 SUPERFAMILY RNI-like 142 468 - -
Lele18g0820 801 Pfam Protein tyrosine and serine/threonine kinase 599 723 IPR001245 GO:0004672|GO:0006468
Lele18g0820 801 SUPERFAMILY Protein kinase-like (PK-like) 570 726 IPR011009 -
Lele18g0820 801 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Lele18g0820 801 PANTHER UNNAMED PRODUCT 139 721 - -
Lele18g0820 801 FunFam Leucine-rich repeat receptor-like protein kinase TDR 181 495 - -
Lele18g0820 801 SUPERFAMILY L domain-like 8 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0820 Lele-ChrLele18 5139471 5142673 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0820 9 795 Receptor kinase-like Gene Family AT5G51350 50.350 0.0 746
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lele18g0820 PK_Tyr_Ser-Thr 5.4e-11 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele18g0820 18 5139471 5142673 Lele19g0852 19 5169094 5172201 hybridization
Lele18g0820 18 5139471 5142673 Lele20g0603 20 13386180 13387989 hybridization