Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0810 ATGGCCGGAAAGCTTCCCGGAGTAGAGTGTGCTCGAAGGAGAAGGTTTCATCAGAGTGGAGTATGGTCTGATTCACCACCATCCTCTATGATTCCACTTACTTCCACTAGACGCTCTTCTTTCTGCTTGTACACTAGCAAGCATGAATCTATGTCTTCTTCCTCTTTACTGGTACCCCCCTTCTCTCTCTCTCTCTCTGCACACCCACATGAAATGCTGGGAGGTGCAGCTGGAGAAGCCAAAAAGAGATTGGATAAGAGATTAGGAACTCAGAGGAAAACAGAGATTAAAAGTAAGCAGAAGAGCAGAGAGAAGGTGAGGAGTGAAGCAGAGTTGCAGATAGAGATATATGGGGCAAAGAAAAATGGAAGCAGGAGATTCAGTTGGAGCAAATTGAGCTGGAAGGCATCGGAACAAGAGGAATGTGCAGTGTGCTTAGAATCATTCAAGAATGGGGATACACTGATAAACCTTCCATGTGCACACAGGAATGGTCAGGGTTTTGTTTCTTTGGACATAGTGTGTTTTTGTAATCATGTGTGA 543 0.4475 MAGKLPGVECARRRRFHQSGVWSDSPPSSMIPLTSTRRSSFCLYTSKHESMSSSSLLVPPFSLSLSAHPHEMLGGAAGEAKKRLDKRLGTQRKTEIKSKQKSREKVRSEAELQIEIYGAKKNGSRRFSWSKLSWKASEQEECAVCLESFKNGDTLINLPCAHRNGQGFVSLDIVCFCNHV 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0810 180 Pfam RING-like zinc finger 141 162 IPR001841 -
Lele18g0810 180 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 87 169 IPR013083 -
Lele18g0810 180 SUPERFAMILY RING/U-box 129 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0810 Lele-ChrLele18 5088564 5089530 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0810 1 88 C3H Transcription Factor Family AT2G15580 46.875 1.89e-14 64.3