Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0805 ATGTGTTTGCAGGACGCCGAGCAAGTTGGCGCCGATATGGAGAGCCCAGATGGTGATAGAAGAATGTCTTGGCCTTTGCATTGTGACCCCTTGCATACCCACATGGAAGAAGAACCTCCTTTTAGAACTTCCGGCGATAGGAGTTTCAGTGTTGTGAATTCAATTCCGCTGGAAAGCATAGGTGAGGACACAGTGATTGCGGACAAAAAACAGAACCAGATGAACTTTGTCCCTGCTCTGCGATCTGGCGAGTGGTCAGATATCGGAGGTCGCTCTTATATGGAAGATACTCACATCTGCATTGGAGACTTAGGAAAGAAATTTGGTTATGATGAACCCAGTGAGGAAGTTATTTCCTTTTATGGAGTGTTTGATGGACACGGAGGGAAGAGTGCTGCGGTATTCGTCCGTGATCGTCTTCCAAGAGTTATAGTTGAGGATTCTGATTTTCCTGTGGAGCTAGAGAAAGTGGTCACAAGGTCATTTTTACAGACAGATGCTGAATTTGCAGAGAGATGTCCCCTTGAGTCTTCTGGTACAACTGCATTAACTGCCATTATTTTTGGGAGGTCTTTGCTAGTGGCCAATGCTGGAGACTGCAGGGCTGTTTTGTCCAGACTTGTTGGTCTGGTTAATACCGAGCATATGGCTAAGTTCAGCCAAGAATCAGATGAAATGGGCAGTTTTAAAATCAACAGTCCCGCTATAATGTTGGAGCATCACAAGCTGTCATGTTATCCCATGCACAGAAAGGGCACATAG 762 0.4567 MCLQDAEQVGADMESPDGDRRMSWPLHCDPLHTHMEEEPPFRTSGDRSFSVVNSIPLESIGEDTVIADKKQNQMNFVPALRSGEWSDIGGRSYMEDTHICIGDLGKKFGYDEPSEEVISFYGVFDGHGGKSAAVFVRDRLPRVIVEDSDFPVELEKVVTRSFLQTDAEFAERCPLESSGTTALTAIIFGRSLLVANAGDCRAVLSRLVGLVNTEHMAKFSQESDEMGSFKINSPAIMLEHHKLSCYPMHRKGT 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0805 253 ProSiteProfiles PPM-type phosphatase domain profile. 81 253 IPR001932 -
Lele18g0805 253 Pfam Protein phosphatase 2C 90 207 IPR001932 -
Lele18g0805 253 PANTHER PROTEIN PHOSPHATASE 2C 68 217 IPR015655 GO:0004722|GO:0006470
Lele18g0805 253 Gene3D - 62 228 IPR036457 -
Lele18g0805 253 MobiDBLite consensus disorder prediction 1 23 - -
Lele18g0805 253 SMART PP2C_4 71 238 IPR001932 -
Lele18g0805 253 SUPERFAMILY PP2C-like 74 206 IPR036457 -
Lele18g0805 253 CDD PP2Cc 81 206 IPR001932 -
Lele18g0805 253 ProSitePatterns PPM-type phosphatase domain signature. 120 128 IPR000222 GO:0043169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0805 Lele-ChrLele18 5069106 5073077 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0805 70 206 PP2C-type Phosphatase Gene Family AT2G25620 57.857 3.71e-49 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBP Lele18g0805 PP2C 1.1e-20 CL0238