Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0778 ATGGCGTTCCTCGTTGGCCTTGTGCTCGGAATCGTCGTCGGCCTTGCTCTCATCGTCGGATTCGTCCGCTATGAGAATGCCAGATCCAAGCTCCTGTCTGAGCTTGCTGAAACGGTTGCCGCTTTCGCTCGGATCACCATTGAAGATTCCAGGAAGATTTTGCCTCATCAGTTCTATCCTCCTTGGTTGACTTGGCTGAACTCACATCTAACTAAGATCTGGCCCTATGTTAACGAGGTTGCTTCTGAGCTAATAAAGGCATCCGTGGAACCAGTTCTCGAGCAATATAGACCAGTGATTTTGGCGTCATTGAAATTTTCGAAGTTCTCTCTCGGTACCGTAGTTCCACAGTTTACAGGAGTTTCTATAATAGAAGATGGAGGTAGCGGCGTTACAATGGAGTTGGAAATGAATTGGGATGGGAATCCAAATATTATACTCGATATTAAGACTCTAATTGGTGTGGCACTAACAGTGCAGAAAAAATTGGATTTTACGTTGAAAGTTGTTGGTGGAGATATTTCAGCAATCCCCGGCTTATCCGATGCAATTGAGGGGTCAATTCGGGATGCTGTTGAAGATTCTATTACATGGCCTGTGAGAAAAGTTGTACCCATTCTGGCCGCAGATTACAGTGATCTGGAGTTGAAGCCTGTGGGCATATTAGAAGTCAAGCTTGTGCAAGCTAAGGAGTTAACAAACAAGGACATTATTGATGAATCCACTCAGCACCTGGTAGTTAAAGTTTATGATTCTGAGGGCTTAATGGCATCTGAACTTATGGGATGTGCGCGCATACGGCTTAGTGAACTCGAGCCTGGTAAAGTTCATTTGGAGCTTTTATACTATCCTTTTGGCATGGAGACTGTGTTTACCAACCCTTTTGTTCGTAATGATCCATTGACATCCTTAGAAAAGGTTCTTAAAAGTGCAGCAAATGGAATAGAATGTATTGAAAATGGAAATGCAGTTACACAGAAGAAAAAGGACGTTATAATCAGAGGAGTCCTTTCTGTTACGGTGATATCTGCTGAAGACTTGCTTGCAGCAGATTTTATGGGGAAATCTGATCCTTATGCTGTTCTCATCATGAAGAAATCAGAAACAAAATGCAGAACCAGGGTTGTGAATAGCACCTTAGATCCAGTTTGGAATCAAACTTTTGACTTTGTTGTTGAGGATGGATTACATGATATGCTAATGGTTGAAATTTGGGACCGCGATACATTTGGAAAGGATTCTCTGGGAAGATGCATATTAACCCTTACGAGGGTCATATTGGAATGTGAATACGAAGAACGTTATGAGCTAGATGAGGCCAAATCTGGATCTTTGAGATTGTTTCTCAAGTGGTTGCCTCAACCGATTTATAGGAGCGATCCCTGA 1386 0.4257 MAFLVGLVLGIVVGLALIVGFVRYENARSKLLSELAETVAAFARITIEDSRKILPHQFYPPWLTWLNSHLTKIWPYVNEVASELIKASVEPVLEQYRPVILASLKFSKFSLGTVVPQFTGVSIIEDGGSGVTMELEMNWDGNPNIILDIKTLIGVALTVQKKLDFTLKVVGGDISAIPGLSDAIEGSIRDAVEDSITWPVRKVVPILAADYSDLELKPVGILEVKLVQAKELTNKDIIDESTQHLVVKVYDSEGLMASELMGCARIRLSELEPGKVHLELLYYPFGMETVFTNPFVRNDPLTSLEKVLKSAANGIECIENGNAVTQKKKDVIIRGVLSVTVISAEDLLAADFMGKSDPYAVLIMKKSETKCRTRVVNSTLDPVWNQTFDFVVEDGLHDMLMVEIWDRDTFGKDSLGRCILTLTRVILECEYEERYELDEAKSGSLRLFLKWLPQPIYRSDP 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0778 461 PANTHER EXTENDED SYNAPTOTAGMIN-RELATED 239 275 IPR045050 GO:0008289
Lele18g0778 461 ProSiteProfiles Synaptotagmin-like mitochondrial lipid-binding proteins (SMP) domain profile. 59 281 IPR031468 GO:0008289
Lele18g0778 461 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 331 454 IPR035892 -
Lele18g0778 461 SMART C2_3c 336 434 IPR000008 -
Lele18g0778 461 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 220 284 IPR035892 -
Lele18g0778 461 Gene3D C2 domain 318 453 IPR035892 -
Lele18g0778 461 FunFam Extended synaptotagmin-2 316 455 - -
Lele18g0778 461 CDD C2 337 434 - -
Lele18g0778 461 ProSiteProfiles C2 domain profile. 318 435 IPR000008 -
Lele18g0778 461 Pfam C2 domain 335 436 IPR000008 -
Lele18g0778 461 Pfam C2 domain 240 276 IPR000008 -
Lele18g0778 461 PRINTS C2 domain signature 400 408 IPR000008 -
Lele18g0778 461 PRINTS C2 domain signature 352 364 IPR000008 -
Lele18g0778 461 PRINTS C2 domain signature 378 391 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0778 Lele-ChrLele18 4867041 4873993 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0778 335 415 C2H2 Transcription Factor Family AT4G05330 38.272 1.73e-07 51.2