Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele18g0758 ATGGAAAGCAAAGGACTGGCACTGAAGCCACATCCCAAAAAGAATCTATGGAAGCCTGAGGAAGACTTGGTTCTGAAAACCTACATTGAAGCTCACGGTGAAGGAAACTGGGAAACAGTTTCCAAAAATTCAGGTCTGAAGAGAGGAGGGAAGAGTTGCAGACTAAGATGGAAGAACTATTTGAGACCTGACATTAAACGCGGAGAAATGTCTGAAGAAGAAGAAGACCTTATCATCAGATTGCATAAGCTTCTTGGCAACCGATGGTCACTGATAGCTGGAAGAATTCCTGGTAGAACCGATAACGAAGTGAAGAACTACTGGAATACCCATTTGAACAAGAGATGCCCTCGAGGCAAAAGGAAAGCAATCGATTCAAACAACGATCACCAAGAAACCAGCAAGAAATCACGAATCAGCGACTCCGAGTTTCCGATTTTTACAAACATTGCAGAGACAGGATCGTTGTTGGATGAGAGGAAAGAAGAGAACGGTAACATCACGAAGTCTTGGATCGACGAAACGCAGATCTTCGACTGTGACCTAGATTTTCCGATTGTGCCCGCAGGGAACAGTGAGGTATTTGGTTTCGAAGATGAGGCTGAAGCTTTCATGACGAATTTGGATTCCATTGTCCTGTTTGAAACTGAAGCTTTAGACTACGGATGGTTGGAGTCCAATTCGCACAAGCAATGCTTCATGCCATAG 708 0.4407 MESKGLALKPHPKKNLWKPEEDLVLKTYIEAHGEGNWETVSKNSGLKRGGKSCRLRWKNYLRPDIKRGEMSEEEEDLIIRLHKLLGNRWSLIAGRIPGRTDNEVKNYWNTHLNKRCPRGKRKAIDSNNDHQETSKKSRISDSEFPIFTNIAETGSLLDERKEENGNITKSWIDETQIFDCDLDFPIVPAGNSEVFGFEDEAEAFMTNLDSIVLFETEALDYGWLESNSHKQCFMP 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele18g0758 235 MobiDBLite consensus disorder prediction 119 139 - -
Lele18g0758 235 FunFam Transcription factor TT2 70 140 - -
Lele18g0758 235 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele18g0758 235 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele18g0758 235 CDD SANT 17 61 IPR001005 -
Lele18g0758 235 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Lele18g0758 235 Gene3D - 69 142 - -
Lele18g0758 235 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele18g0758 235 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele18g0758 235 FunFam MYB-related transcription factor 13 66 - -
Lele18g0758 235 Pfam Myb-like DNA-binding domain 15 61 IPR001005 -
Lele18g0758 235 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lele18g0758 235 Gene3D - 14 66 - -
Lele18g0758 235 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 9 140 - -
Lele18g0758 235 SMART sant 13 63 IPR001005 -
Lele18g0758 235 SMART sant 66 114 IPR001005 -
Lele18g0758 235 CDD SANT 69 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele18g0758 Lele-ChrLele18 4656017 4657570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele18g0758 1 182 MYB Transcription Factor Family AT5G52600 54.595 2.84e-62 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele18g0758 Myb_DNA-binding 3.7e-11 CL0123